DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AP-2mu and apm4

DIOPT Version :10

Sequence 1:NP_651049.3 Gene:AP-2mu / 42642 FlyBaseID:FBgn0263351 Length:437 Species:Drosophila melanogaster
Sequence 2:NP_592921.1 Gene:apm4 / 2541527 PomBaseID:SPAC31A2.09C Length:446 Species:Schizosaccharomyces pombe


Alignment Length:450 Identity:176/450 - (39%)
Similarity:283/450 - (62%) Gaps:19/450 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHIKRANIWL 65
            ||.|||::|.||:.||.:.:|.|:.::..:.|||.:: .....|.|:.:|..:::.:.|..::::
pombe     1 MISGLFIFNLKGDTLICKTFRHDLKKSVTEIFRVAIL-TNTDYRHPIVSIGSSTYIYTKHEDLYV 64

  Fly    66 AAVTKQNVNAAMVFEFLLKIIEVMQSYFGKISEENIKNNFVLIYELLDEILDFGYPQNTDSGTLK 130
            .|:||.|.|..:|.|||..:|:.:..||||::|..:|:|...|:|||||::|:|..|.|:...|.
pombe    65 VAITKGNPNVMIVLEFLESLIQDLTHYFGKLNENTVKDNVSFIFELLDEMIDYGIIQTTEPDALA 129

  Fly   131 TFITQQGIK------SATKEEQMQI----TSQVTGQIGWRREGIKYRRNELFLDVLEYVNLLMSP 185
            ..::...:|      |..:....|:    :|::.|.:.|||.|||||:|.:::|::|.:|||:|.
pombe   130 RSVSITAVKKKGNALSLKRSHSSQLAHTTSSEIPGSVPWRRAGIKYRKNSIYIDIVERMNLLISS 194

  Fly   186 QGQVLSAHVAGKVVMKSYLSGMPECKFGINDKI---VMESKGRGLSGNSEAETSRSGKPVVVIDD 247
            .|.||.:.|:|.|.|::.|||||||:||:|||:   :.:|:.:..|.||...:|.:| ..|:::|
pombe   195 TGNVLRSDVSGVVKMRAMLSGMPECQFGLNDKLDFKLKQSESKSKSNNSRNPSSVNG-GFVILED 258

  Fly   248 CQFHQCVKLSKFETEHSISFIPPDGEFELMRYRTTKDISLPFRVIPLVREVGRTKMEVKVVLKSN 312
            |||||||:|.:||.||.|:|||||||.|||.||:.::|::|||::|:|.::.:.|:..::.::::
pombe   259 CQFHQCVRLPEFENEHRITFIPPDGEVELMSYRSHENINIPFRIVPIVEQLSKQKIIYRISIRAD 323

  Fly   313 FKPSLLGQKIEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLET 377
            : |..|...:..:||.|.|.........:|||.|:.|||.|.|||.|..|..|....||:||..|
pombe   324 Y-PHKLSSSLNFRIPVPTNVVKANPRVNRGKAGYEPSENIINWKIPRFLGETELIFYAEVELSNT 387

  Fly   378 DTKKKWTRPPISMNFEV-PFAPSGFKVRYLKVFEPKLNYSDHDVVKWVRYIGRSGLYETR 436
            ..::.|.:||||::|.: .|..||..|:||:|.||  :.|.:..:|||||..|:|..|.|
pombe   388 TNQQIWAKPPISLDFNILMFTSSGLHVQYLRVSEP--SNSKYKSIKWVRYSTRAGTCEIR 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-2muNP_651049.3 AP2_Mu_N 1..140 CDD:341440 48/144 (33%)
AP-2_Mu2_Cterm 166..436 CDD:271159 117/273 (43%)
apm4NP_592921.1 AP2_Mu_N 1..139 CDD:341440 47/138 (34%)
AP-2_Mu2_Cterm 175..445 CDD:271159 117/273 (43%)

Return to query results.
Submit another query.