DRSC/TRiP Functional Genomics Resources

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Protein Alignment AP-2mu and apm3

DIOPT Version :9

Sequence 1:NP_001163686.1 Gene:AP-2mu / 42642 FlyBaseID:FBgn0263351 Length:437 Species:Drosophila melanogaster
Sequence 2:NP_595509.1 Gene:apm3 / 2541119 PomBaseID:SPBC651.11c Length:425 Species:Schizosaccharomyces pombe


Alignment Length:483 Identity:101/483 - (20%)
Similarity:189/483 - (39%) Gaps:131/483 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 IGGLFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQV-RSPVTNIARTSFFHIK------ 59
            |..:::.:..|.:|:....|   ||.:    .:.:.|.:.:: |..:.|.......|.|      
pombe     4 IEAIYLVDTNGALLLQLESR---GRTS----PITLEHIKNELFRYKLRNEEPPFILHNKNFLIFQ 61

  Fly    60 --RANIWLAAVTKQNVNAAMVFEFLLKIIEVMQSYFGKISEENIKNNFVLIYELLDEILDFGYPQ 122
              ..::.|...|..:.....:.:.:.:|::|::::||..:...::.|..:|.:||.|::|:||..
pombe    62 ELEEDVRLCIPTTCDTEPLYIHDIMRRIVDVVKTFFGGFNASKVEKNVCVIVQLLAEMIDYGYAT 126

  Fly   123 NTDSGTLK----------TFITQQGIKSATKEEQMQITSQVTGQIGWRREGIKYRRNELFLDVLE 177
            ..:...|:          .|:...|:::.|       .:.....:.||....||..||.|:.|||
pombe   127 CMEPNALQDIVPLPSFMNKFMAVTGLQTNT-------PTLARDTVPWRTAKAKYATNEFFIHVLE 184

  Fly   178 YVNLLMSPQGQVLSAHVAGKVVMKSYLSGMPECKFGINDKIVMESKGRGLSGNSEAETSRSGKPV 242
            .|:.:..|.|::....|...:..|..:||||.....:                         :|.
pombe   185 RVSAVYQPNGKLAFGTVKSDMECKCQISGMPLLLLSL-------------------------RPG 224

  Fly   243 VVIDDCQFHQCVKLSKFETEH--SISFIPPDGEFELMRYRTTKDISLPFRVIPLVREVGRTKME- 304
            ..:.:.:|||.|.|.::: :|  .|.||||||:|.|..::|  |.:.. :.:|:|.| .:.|:: 
pombe   225 TKLGNVRFHQSVNLKRWK-QHPDQIEFIPPDGKFTLASFQT--DFATQ-KSLPVVVE-AKNKLDG 284

  Fly   305 -VKVVLKSNFKPSLLGQKIEVKIPTPLNTSGVQLICLKGKAKYKAS------ENAIVWKIKRMAG 362
             .:|.:::..|.|:...||.:.||..|.:..|    .:|...::||      |..:.|.:|::| 
pombe   285 RFEVRIRNTGKKSVENLKILITIPQALKSVTV----TEGNYIFRASKYTHMEEGILEWSVKKLA- 344

  Fly   363 MKETQLSAEIELLETDTKKKWTRPPISM-NFEVPFAPS--------------------------- 399
                                ||.|.:.: .|..|....                           
pombe   345 --------------------WTSPALVLTGFLAPLKKDANSTEESSSYSKLEHLDLQYKLQGSTL 389

  Fly   400 -GFKVRYLKVFEPKLNYSDHDVVKWVRY 426
             .|||..||:    ||:.|....|.|::
pombe   390 HNFKVESLKM----LNHPDKKSYKGVKH 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-2muNP_001163686.1 AP2_Mu_N 1..140 CDD:341440 28/156 (18%)
AP-2_Mu2_Cterm 166..436 CDD:271159 69/300 (23%)
apm3NP_595509.1 AP-3_Mu3_Cterm 164..423 CDD:271160 72/309 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53686
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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