DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AP-2mu and AP1M2

DIOPT Version :10

Sequence 1:NP_651049.3 Gene:AP-2mu / 42642 FlyBaseID:FBgn0263351 Length:437 Species:Drosophila melanogaster
Sequence 2:NP_001287816.1 Gene:AP1M2 / 10053 HGNCID:558 Length:425 Species:Homo sapiens


Alignment Length:434 Identity:165/434 - (38%)
Similarity:262/434 - (60%) Gaps:18/434 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LFVYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQ-VRSPVTNIARTSFFHIKRANIWLAAV 68
            :|:.:.||:.||||.|:.|:..:.::.|...::...:: ..:|:.:..:..|..||.:|::|.|.
Human     6 VFILDVKGKPLISRNYKGDVAMSKIEHFMPLLVQREEEGALAPLLSHGQVHFLWIKHSNLYLVAT 70

  Fly    69 TKQNVNAAMVFEFLLKIIEVMQSYFGKISEENIKNNFVLIYELLDEILDFGYPQNTDSGTLKTFI 133
            |.:|.||::|:.||.|.|||...||.::.||:|::|||::||||||::|||:||.|||..|:.:|
Human    71 TSKNANASLVYSFLYKTIEVFCEYFKELEEESIRDNFVIVYELLDELMDFGFPQTTDSKILQEYI 135

  Fly   134 TQQGIKSATKEEQMQITSQVTGQIGWRREGIKYRRNELFLDVLEYVNLLMSPQGQVLSAHVAGKV 198
            |||..|..|.:.::..|  ||..:.||.|||||::||:|:||:|.||||::..|.||.:.:.|.:
Human   136 TQQSNKL
ETGKSRVPPT--VTNAVSWRSEGIKYKKNEVFIDVIESVNLLVNANGSVLLSEIVGTI 198

  Fly   199 VMKSYLSGMPECKFGINDKIVMESKGRGLSGNSEAETSRSGKPVVVIDDCQFHQCVKLSKFETEH 263
            .:|.:||||||.:.|:||:::.|..|...|.|...|          ::|.:|||||:||:|:.:.
Human   199 KLKVFLSGMPELRLGLNDRVLFELTGLSGSKNKSVE----------LEDVKFHQCVRLSRFDNDR 253

  Fly   264 SISFIPPDGEFELMRYRTTKDISLPFRVIPLVREVGRTKMEVKVVLKSNFKPSLLGQKIEVKIPT 328
            :||||||||:||||.||.:..:.....:..::.:...:::|:.|..|..||...:...:|:.:|.
Human   254 TISFIPPDGDFELMSYRLSTQVKPLIWIESVIEKFSHSRVEIMVKAKGQFKKQSVANGVEISVPV 318

  Fly   329 PLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIELLETDTKKKWTRPPISMNFE 393
            |.:....:.....|.|||....|.::|.||...|.||..:.|...|...:.::...||||.:.||
Human   319 PSDADSPRFKTSVGSAKYVPERNVVIWSIKSFPGGKEYLMRAHFGLPSVEKEEVEGRPPIGVKFE 383

  Fly   394 VP-FAPSGFKVRYLKVFEPKLNYSDHDVVKWVRYIGRSGLYETR 436
            :| |..||.:|||:|:.|.    |.:..:.|||||.:||.|:.|
Human   384 IPYFTVSGIQVRYMKIIEK----SGYQALPWVRYITQSGDYQLR 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP-2muNP_651049.3 AP2_Mu_N 1..140 CDD:341440 55/135 (41%)
AP-2_Mu2_Cterm 166..436 CDD:271159 98/270 (36%)
AP1M2NP_001287816.1 AP1_Mu_N 4..142 CDD:341439 55/135 (41%)
AP_MHD_Cterm 154..423 CDD:472082 105/282 (37%)

Return to query results.
Submit another query.