DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34376 and lola

DIOPT Version :10

Sequence 1:NP_732741.1 Gene:CG34376 / 42638 FlyBaseID:FBgn0085405 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_788308.3 Gene:lola / 44548 FlyBaseID:FBgn0283521 Length:970 Species:Drosophila melanogaster


Alignment Length:826 Identity:179/826 - (21%)
Similarity:271/826 - (32%) Gaps:249/826 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDDEFKLC--WKNFQDNIASGFQNLYDRGDLVDVTLACDGKLLHAHKIVLAICSPYFQEIFTTNP 63
            |||:.:.|  |.|.|..:.|.|..|.:...|||.|||.:||.|.|||:||:.|||||..:.....
  Fly     1 MDDDQQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQY 65

  Fly    64 CKHPIIILKDVSFNIMMELLEFMYQGVVNVKHTELQSFMKIGQLLQIKGLATN------------ 116
            .||||.|||||.:..:..::::||:|.||:...:|.:.:|..:.||||||:.|            
  Fly    66 DKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSDNRTGGGVAPKPES 130

  Fly   117 -----------------------------------SNSSPGSS---------------------- 124
                                               |.|..|||                      
  Fly   131 SGHHRGGKLSGAYTLEQTKRARLATGGAMDTSGDVSGSREGSSSPSRRRRKVRRRSMENDAHDNS 195

  Fly   125 ---------------------------VSEKSSSQPPAEESSNTNSTNHHNSSTNSNNNSKSETD 162
                                       |:.:.||.|.|..||..:||......|::|...|:|: 
  Fly   196 NSSVLQAAASNQSILQQTGAGLAVSALVTTQLSSGPAAGTSSQASSTQQQQPLTSTNVTKKTES- 259

  Fly   163 HNESKGQSNSRTTSPGGASRASNDASHLYTSNKRPMPSDFGSDSLSIYSGKQLRRSLKDHGSGGS 227
               :|..|::...:.|.::.|:...:||:....:..     ||:::       ..:::....||:
  Fly   260 ---AKLTSSTAAPASGASASAAVQQAHLHQQQAQTT-----SDAIN-------TENVQAQSQGGA 309

  Fly   228 EGGGGDHAD----TAAGLDNSMNSEEFFLPPIPQITMGEQRYDLGGLKRESDGHHHGPLSAGGGN 288
            :|..||..|    :|.|..||.............:..|.....|..:..:|..:|...:     .
  Fly   310 QGVQGDDEDIDEGSAVGGPNSATGPNPASASASAVHAGVVVKQLASVVDKSSSNHKHKI-----K 369

  Fly   289 SGSVGSLTSS--ASPSAPIRNPFAPNFMDSFNY-----------YKGGNSSGPSGSSNNSVGPGG 340
            ..||.|:.|.  ..|.|...:......::....           ...|.|.|..|||........
  Fly   370 DNSVSSVGSEMVIEPKAEYDDDAHDENVEDLTLDEEDMTMEELDQTAGTSQGGEGSSQTYATWQH 434

  Fly   341 VNNNGSVGL-GSGAEYPNELYMPNDYSKSFANHMDIPSSGSNMVMLSTTSLLHGNCVFNRNNTVA 404
            ..:...:|| ...|:..:......|..:......|              .....:|:...|:.|.
  Fly   435 DRSQDELGLMAQDAQQRDPQASKQDKGEQTEGAQD--------------EFELDDCLLESNDIVI 485

  Fly   405 TQ--QGMKTYWLCKSYRISMCRARCITHLGRIISATGVHNHTPHMRGGQGSSAPSTASVSGNPAP 467
            ||  .|...:               :..||.|.:|....|.....:  ||.:|.:....:|.|.|
  Fly   486 TQNKDGFVLH---------------VKKLGNITAAKLEENQAVAQQ--QGQAAVTVTGPAGQPTP 533

  Fly   468 TPISSQAGYSLTDGGGHLGPDLQHGNRVTNMFANQTPPPPPPPPPL-PVASTP------------ 519
            |                          :|.:..........|.|.| .:.|||            
  Fly   534 T--------------------------ITELLNAAAASHSEPKPTLTTLTSTPIKLPSSECELIN 572

  Fly   520 -------------HHPH------HHHHLGQPLPNLLVQHHPAPSHMEQHGSSASLLHNPNLMHLQ 565
                         ||||      |.||        ::||.....|.::|......:|...:.  |
  Fly   573 IKKIIPATTTIATHHPHTSSTIIHPHH--------IIQHVSQEPHHQEHHQQHQTIHIEEVP--Q 627

  Fly   566 TPTHHHQQQHHQQHSPHNPPPPQ-QHNLELGGGSGSGAVLLSPAHLQQS-PQSNRSSHSLQAQSP 628
            |...|||||||.|.....|...| |..:....|.....|.|....|..| |.::|..:|......
  Fly   628 TSQQHHQQQHHHQLQTVQPTHTQVQSIITAHPGQTINLVGLRNVQLADSKPIASRIRYSRGKIIG 692

  Fly   629 PP----QSVEEQQPHQQQQQQ-QEGATTEVT----TDPSTAHVINS 665
            |.    |.||..:|.|.|..: .:|...|::    .:|:.:..|.|
  Fly   693 PTVQNLQIVETHEPIQHQHHELSDGTKYEISEIDLNNPNASAAIIS 738

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34376NP_732741.1 BTB_POZ_BAB-like 29..112 CDD:349624 38/82 (46%)
FLYWCH 387..443 CDD:461332 10/57 (18%)
lolaNP_788308.3 BTB_POZ_BAB-like 31..114 CDD:349624 38/82 (46%)
C2H2 Zn finger 905..925 CDD:275368
zf-H2C2_5 935..957 CDD:404746
C2H2 Zn finger 935..955 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.