DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34376 and lola

DIOPT Version :9

Sequence 1:NP_732741.1 Gene:CG34376 / 42638 FlyBaseID:FBgn0085405 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_788308.3 Gene:lola / 44548 FlyBaseID:FBgn0283521 Length:970 Species:Drosophila melanogaster


Alignment Length:826 Identity:179/826 - (21%)
Similarity:271/826 - (32%) Gaps:249/826 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDDEFKLC--WKNFQDNIASGFQNLYDRGDLVDVTLACDGKLLHAHKIVLAICSPYFQEIFTTNP 63
            |||:.:.|  |.|.|..:.|.|..|.:...|||.|||.:||.|.|||:||:.|||||..:.....
  Fly     1 MDDDQQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQY 65

  Fly    64 CKHPIIILKDVSFNIMMELLEFMYQGVVNVKHTELQSFMKIGQLLQIKGLATN------------ 116
            .||||.|||||.:..:..::::||:|.||:...:|.:.:|..:.||||||:.|            
  Fly    66 DKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSDNRTGGGVAPKPES 130

  Fly   117 -----------------------------------SNSSPGSS---------------------- 124
                                               |.|..|||                      
  Fly   131 SGHHRGGKLSGAYTLEQTKRARLATGGAMDTSGDVSGSREGSSSPSRRRRKVRRRSMENDAHDNS 195

  Fly   125 ---------------------------VSEKSSSQPPAEESSNTNSTNHHNSSTNSNNNSKSETD 162
                                       |:.:.||.|.|..||..:||......|::|...|:|: 
  Fly   196 NSSVLQAAASNQSILQQTGAGLAVSALVTTQLSSGPAAGTSSQASSTQQQQPLTSTNVTKKTES- 259

  Fly   163 HNESKGQSNSRTTSPGGASRASNDASHLYTSNKRPMPSDFGSDSLSIYSGKQLRRSLKDHGSGGS 227
               :|..|::...:.|.::.|:...:||:....:..     ||:::       ..:::....||:
  Fly   260 ---AKLTSSTAAPASGASASAAVQQAHLHQQQAQTT-----SDAIN-------TENVQAQSQGGA 309

  Fly   228 EGGGGDHAD----TAAGLDNSMNSEEFFLPPIPQITMGEQRYDLGGLKRESDGHHHGPLSAGGGN 288
            :|..||..|    :|.|..||.............:..|.....|..:..:|..:|...:     .
  Fly   310 QGVQGDDEDIDEGSAVGGPNSATGPNPASASASAVHAGVVVKQLASVVDKSSSNHKHKI-----K 369

  Fly   289 SGSVGSLTSS--ASPSAPIRNPFAPNFMDSFNY-----------YKGGNSSGPSGSSNNSVGPGG 340
            ..||.|:.|.  ..|.|...:......::....           ...|.|.|..|||........
  Fly   370 DNSVSSVGSEMVIEPKAEYDDDAHDENVEDLTLDEEDMTMEELDQTAGTSQGGEGSSQTYATWQH 434

  Fly   341 VNNNGSVGL-GSGAEYPNELYMPNDYSKSFANHMDIPSSGSNMVMLSTTSLLHGNCVFNRNNTVA 404
            ..:...:|| ...|:..:......|..:......|              .....:|:...|:.|.
  Fly   435 DRSQDELGLMAQDAQQRDPQASKQDKGEQTEGAQD--------------EFELDDCLLESNDIVI 485

  Fly   405 TQ--QGMKTYWLCKSYRISMCRARCITHLGRIISATGVHNHTPHMRGGQGSSAPSTASVSGNPAP 467
            ||  .|...:               :..||.|.:|....|.....:  ||.:|.:....:|.|.|
  Fly   486 TQNKDGFVLH---------------VKKLGNITAAKLEENQAVAQQ--QGQAAVTVTGPAGQPTP 533

  Fly   468 TPISSQAGYSLTDGGGHLGPDLQHGNRVTNMFANQTPPPPPPPPPL-PVASTP------------ 519
            |                          :|.:..........|.|.| .:.|||            
  Fly   534 T--------------------------ITELLNAAAASHSEPKPTLTTLTSTPIKLPSSECELIN 572

  Fly   520 -------------HHPH------HHHHLGQPLPNLLVQHHPAPSHMEQHGSSASLLHNPNLMHLQ 565
                         ||||      |.||        ::||.....|.::|......:|...:.  |
  Fly   573 IKKIIPATTTIATHHPHTSSTIIHPHH--------IIQHVSQEPHHQEHHQQHQTIHIEEVP--Q 627

  Fly   566 TPTHHHQQQHHQQHSPHNPPPPQ-QHNLELGGGSGSGAVLLSPAHLQQS-PQSNRSSHSLQAQSP 628
            |...|||||||.|.....|...| |..:....|.....|.|....|..| |.::|..:|......
  Fly   628 TSQQHHQQQHHHQLQTVQPTHTQVQSIITAHPGQTINLVGLRNVQLADSKPIASRIRYSRGKIIG 692

  Fly   629 PP----QSVEEQQPHQQQQQQ-QEGATTEVT----TDPSTAHVINS 665
            |.    |.||..:|.|.|..: .:|...|::    .:|:.:..|.|
  Fly   693 PTVQNLQIVETHEPIQHQHHELSDGTKYEISEIDLNNPNASAAIIS 738

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34376NP_732741.1 BTB 20..113 CDD:279045 41/92 (45%)
BTB 31..115 CDD:197585 39/83 (47%)
FLYWCH 390..443 CDD:282369 10/54 (19%)
lolaNP_788308.3 BTB 22..117 CDD:279045 43/94 (46%)
BTB 33..117 CDD:197585 39/83 (47%)
C2H2 Zn finger 905..925 CDD:275368
C2H2 Zn finger 935..955 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 68 1.000 Domainoid score I9675
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
44.010

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