DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34376 and Trl

DIOPT Version :9

Sequence 1:NP_732741.1 Gene:CG34376 / 42638 FlyBaseID:FBgn0085405 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_001261846.1 Gene:Trl / 2768981 FlyBaseID:FBgn0013263 Length:623 Species:Drosophila melanogaster


Alignment Length:725 Identity:147/725 - (20%)
Similarity:233/725 - (32%) Gaps:252/725 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDDEFKLCWKNFQDNIASGFQNLYDRGDLVDVTLACDGKLLHAHKIVLAICSPYFQEIFTTNPCK 65
            |:..:.|.|.::..::.|..|.|...|||||.|||..|:...||||||...||:..::....|||
  Fly     5 MNSLYSLTWGDYGTSLVSAIQLLRCHGDLVDCTLAAGGRSFPAHKIVLCAASPFLLDLLKNTPCK 69

  Fly    66 HPIIILKDVSFNIMMELLEFMYQGVVNVKHTELQSFMKIGQLLQIKGLATNSNSSPGSSVSEKSS 130
            ||:::|..|:.|.:..||||:|:|.|:|.|.:|.|.::..|.|.|:|||                
  Fly    70 HPVVMLAGVNANDLEALLEFVYRGEVSVDHAQLPSLLQAAQCLNIQGLA---------------- 118

  Fly   131 SQPPAEESSNTNS-------TNHHNSS--TNSNNNSKSETDHNE------SKGQSNSRTTSPGGA 180
            .|...::...|:|       ..||:..  ..:...:..:|.|.:      .:||....||....|
  Fly   119 PQTVTKDDYTTHSIQLQHMIPQHHDQDQLIATIATAPQQTVHAQVVEDIHHQGQILQATTQTNAA 183

  Fly   181 SR-----ASNDASH--------LYTSNKRPMPSDFG--SDSLSIYSGKQ--LRRSLKDHGSG--- 225
            .:     .::.|.|        |....::|......  :..:|...|..  :......||||   
  Fly   184 GQQQTIVTTDAAKHDQAVIQAFLPARKRKPRVKKMSPTAPKISKVEGMDTIMGTPTSSHGSGSVQ 248

  Fly   226 ---GSEGGGGDHADTAAGLDNSMNSEEFFLPPIPQITMGEQRYDLGGLKRESDGHHHGPLSAGGG 287
               |..|..|....:...:.:.....|..      :||              |.::..|:::...
  Fly   249 QVLGENGAEGQLLSSTPIIKSEGQKVETI------VTM--------------DPNNMIPVTSANA 293

  Fly   288 NSGSVGSLTSSASPSAPIRNPFAPNFMDSFNYYKGGNSSG--PSGSSNNSVGPGGVNNNGSVGLG 350
            .:|.:.....:...|                   |||:||  .:..:..:..|.|.....|   .
  Fly   294 ATGEITPAQGATGSS-------------------GGNTSGVLSTPKAKRAKHPPGTEKPRS---R 336

  Fly   351 SGAEYPNE---LYMPNDYSKSFANHMDI-------------PSSGSNMVMLSTTSLLHGNCVFNR 399
            |.:|.|..   .|.....|::...|:::             ..||::..:.|:..:   |.....
  Fly   337 SQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGVKKEKKSKSGNDTTLDSSMEM---NTTAEG 398

  Fly   400 NNTVATQQGMKTYWLCKSYRISMCRARCITHLGRIISATGVHNHTPHMRGGQGSSAPSTASVSGN 464
            :|||.:...                                        ||.||:...:::.||.
  Fly   399 DNTVGSDGA----------------------------------------GGAGSAGGQSSATSGK 423

  Fly   465 PAPTPISSQAGYSLTDGGGHLGPDLQHGNRVTNMFANQTPPPPPPPPPLPVASTPHHPHHHHHLG 529
            .:.:..|.....:|:..|.                             :|...|....|      
  Fly   424 KSSSGSSGSGSGALSSSGS-----------------------------VPQVQTVQSLH------ 453

  Fly   530 QPLPNLLVQHHPAPSHMEQHGSSASLLHNPNLMHLQTPTHHHQQQHHQQHSPHNPPPPQQHNLEL 594
             .|..:.|:..|.....:|                       |||..||..       ||..:.:
  Fly   454 -TLQGVQVKKDPDAQQQQQ-----------------------QQQQQQQQQ-------QQQAMTV 487

  Fly   595 GGGSGSGAVLLSPAHLQQSPQSNRSSHSLQAQSPPPQSVEEQQPHQQQQQQQ---------EGAT 650
            .|.:|        ..:||..|        |.|    |.|::||..|||||||         .|..
  Fly   488 SGATG--------GQVQQQVQ--------QVQ----QQVQQQQQQQQQQQQQLQHHQIIDSSGNI 532

  Fly   651 TEVTTDPSTA 660
            |..||....|
  Fly   533 TTATTSAQAA 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34376NP_732741.1 BTB 20..113 CDD:279045 41/92 (45%)
BTB 31..115 CDD:197585 37/83 (45%)
FLYWCH 390..443 CDD:282369 4/52 (8%)
TrlNP_001261846.1 BTB 27..117 CDD:279045 40/89 (45%)
BTB 35..118 CDD:197585 36/82 (44%)
GAGA 319..372 CDD:150045 9/55 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 69 1.000 Domainoid score I9606
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 80 1.000 Inparanoid score I5230
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.060

Return to query results.
Submit another query.