DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34376 and Trl

DIOPT Version :10

Sequence 1:NP_732741.1 Gene:CG34376 / 42638 FlyBaseID:FBgn0085405 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_001261846.1 Gene:Trl / 2768981 FlyBaseID:FBgn0013263 Length:623 Species:Drosophila melanogaster


Alignment Length:725 Identity:147/725 - (20%)
Similarity:233/725 - (32%) Gaps:252/725 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDDEFKLCWKNFQDNIASGFQNLYDRGDLVDVTLACDGKLLHAHKIVLAICSPYFQEIFTTNPCK 65
            |:..:.|.|.::..::.|..|.|...|||||.|||..|:...||||||...||:..::....|||
  Fly     5 MNSLYSLTWGDYGTSLVSAIQLLRCHGDLVDCTLAAGGRSFPAHKIVLCAASPFLLDLLKNTPCK 69

  Fly    66 HPIIILKDVSFNIMMELLEFMYQGVVNVKHTELQSFMKIGQLLQIKGLATNSNSSPGSSVSEKSS 130
            ||:::|..|:.|.:..||||:|:|.|:|.|.:|.|.::..|.|.|:|||                
  Fly    70 HPVVMLAGVNANDLEALLEFVYRGEVSVDHAQLPSLLQAAQCLNIQGLA---------------- 118

  Fly   131 SQPPAEESSNTNS-------TNHHNSS--TNSNNNSKSETDHNE------SKGQSNSRTTSPGGA 180
            .|...::...|:|       ..||:..  ..:...:..:|.|.:      .:||....||....|
  Fly   119 PQTVTKDDYTTHSIQLQHMIPQHHDQDQLIATIATAPQQTVHAQVVEDIHHQGQILQATTQTNAA 183

  Fly   181 SR-----ASNDASH--------LYTSNKRPMPSDFG--SDSLSIYSGKQ--LRRSLKDHGSG--- 225
            .:     .::.|.|        |....::|......  :..:|...|..  :......||||   
  Fly   184 GQQQTIVTTDAAKHDQAVIQAFLPARKRKPRVKKMSPTAPKISKVEGMDTIMGTPTSSHGSGSVQ 248

  Fly   226 ---GSEGGGGDHADTAAGLDNSMNSEEFFLPPIPQITMGEQRYDLGGLKRESDGHHHGPLSAGGG 287
               |..|..|....:...:.:.....|..      :||              |.::..|:::...
  Fly   249 QVLGENGAEGQLLSSTPIIKSEGQKVETI------VTM--------------DPNNMIPVTSANA 293

  Fly   288 NSGSVGSLTSSASPSAPIRNPFAPNFMDSFNYYKGGNSSG--PSGSSNNSVGPGGVNNNGSVGLG 350
            .:|.:.....:...|                   |||:||  .:..:..:..|.|.....|   .
  Fly   294 ATGEITPAQGATGSS-------------------GGNTSGVLSTPKAKRAKHPPGTEKPRS---R 336

  Fly   351 SGAEYPNE---LYMPNDYSKSFANHMDI-------------PSSGSNMVMLSTTSLLHGNCVFNR 399
            |.:|.|..   .|.....|::...|:::             ..||::..:.|:..:   |.....
  Fly   337 SQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGVKKEKKSKSGNDTTLDSSMEM---NTTAEG 398

  Fly   400 NNTVATQQGMKTYWLCKSYRISMCRARCITHLGRIISATGVHNHTPHMRGGQGSSAPSTASVSGN 464
            :|||.:...                                        ||.||:...:::.||.
  Fly   399 DNTVGSDGA----------------------------------------GGAGSAGGQSSATSGK 423

  Fly   465 PAPTPISSQAGYSLTDGGGHLGPDLQHGNRVTNMFANQTPPPPPPPPPLPVASTPHHPHHHHHLG 529
            .:.:..|.....:|:..|.                             :|...|....|      
  Fly   424 KSSSGSSGSGSGALSSSGS-----------------------------VPQVQTVQSLH------ 453

  Fly   530 QPLPNLLVQHHPAPSHMEQHGSSASLLHNPNLMHLQTPTHHHQQQHHQQHSPHNPPPPQQHNLEL 594
             .|..:.|:..|.....:|                       |||..||..       ||..:.:
  Fly   454 -TLQGVQVKKDPDAQQQQQ-----------------------QQQQQQQQQ-------QQQAMTV 487

  Fly   595 GGGSGSGAVLLSPAHLQQSPQSNRSSHSLQAQSPPPQSVEEQQPHQQQQQQQ---------EGAT 650
            .|.:|        ..:||..|        |.|    |.|::||..|||||||         .|..
  Fly   488 SGATG--------GQVQQQVQ--------QVQ----QQVQQQQQQQQQQQQQLQHHQIIDSSGNI 532

  Fly   651 TEVTTDPSTA 660
            |..||....|
  Fly   533 TTATTSAQAA 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34376NP_732741.1 BTB_POZ_BAB-like 29..112 CDD:349624 37/82 (45%)
FLYWCH 387..443 CDD:461332 4/55 (7%)
TrlNP_001261846.1 BTB_POZ_BAB-like 33..116 CDD:349624 37/82 (45%)
GAGA 319..372 CDD:462719 9/55 (16%)

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