DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12499 and URB1

DIOPT Version :9

Sequence 1:NP_651044.1 Gene:CG12499 / 42637 FlyBaseID:FBgn0038968 Length:2059 Species:Drosophila melanogaster
Sequence 2:NP_012911.3 Gene:URB1 / 853855 SGDID:S000001497 Length:1764 Species:Saccharomyces cerevisiae


Alignment Length:1985 Identity:344/1985 - (17%)
Similarity:667/1985 - (33%) Gaps:578/1985 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 KRGKPLELAEAFERIDKTNLFHVDYLTEALHRVLMEILTNQKSHMESAVHGCRYFLKVHGGVLEN 218
            :||...:|.:.:....:.|.......|.:|....:.:|::..|.:.......|..|..:..||..
Yeast    56 QRGFGAQLVQTWSYYAQVNNHGKFSKTTSLLTKTLRVLSSDTSTVTIGSGLIRLILTDYTKVLYR 120

  Fly   219 QMKSMQLGHRRNALKLLTAIVCV-EPQLARQVLNSYDVLSNVTVTQKLLSHEKSEY--------- 273
            .:.:|:.......|:||..||.. ..|...::::.:|.  ::.:..:||...|||.         
Yeast   121 GLNNMRAQLTNPILRLLKQIVNFNNGQHIEELVSYFDF--SLPILPRLLVPSKSELANGNSSADS 183

  Fly   274 QCEDTVRKAFILFILAFLVEGNTLLIRNIL-DRGQLIGVLAKGL------VYDDHVTVCVVLNAL 331
            ...|::|..||.|.|..:...:..:.:.:| :..:::..|.|.:      ...:|: :.|.:|. 
Yeast   184 SKHDSLRFTFIKFWLTLISNASPFVRKELLTENFKIMSNLFKFMNKADSDKLSEHI-LSVFIND- 246

  Fly   332 RQYVLENPEIQKTKKVLVFDLECCKNLRRLYDWEGPMGLKVMFAKSKHVSKIPPNPQEAEAVSAA 396
               :|:....::|.|..:.:......:...|           ::.:|::.|             .
Yeast   247 ---ILKEKSFKRTTKTKILNELAASKIHHFY-----------YSSNKNLVK-------------K 284

  Fly   397 VHELLLVLLTSRKHGICF------------DAMTH-----YRQKQNKLQGRLLGS---LFKPYDN 441
            .:|..|....||...:.|            |..:|     ..|.:.::..:||.:   ||||:::
Yeast   285 ANEFFLTFGASRDFSVAFPDNCVWFKNSVADGASHGAPITVNQVEFQIHNKLLFNTLRLFKPWED 349

  Fly   442 PRKVDLVIQTLTACPDLGRNTVRNCSSLLSPVKTKPKDLPIAVAFLAQIINAVPPSALSAAFDKM 506
            ..::..:|:.|...|:           |::|..          .||....|..|         ||
Yeast   350 TLQLGTLIKILENVPE-----------LVAPYS----------IFLTTNGNYDP---------KM 384

  Fly   507 TLTDFSFWIKELCLPIEALLHITGKKYLSDPDFNL----RLAVLRLLLSMM-------------- 553
            |    |:|. .:.|.|..::::...:::...|.|:    .|.:..:|.|::              
Yeast   385 T----SYWF-GITLLINKIINLKIPQFMEKVDSNIPPATSLVIENILPSLLTKSSLVKSLQFETP 444

  Fly   554 --KQYSNYMNAIAVREQSKKA----GNSLRKFKFDLLNHLLVHFPTIESILYSLYMFIKQKNVEG 612
              :|.:.....:|:::..|.:    ....|..|..|||......|       .|.:|:.      
Yeast   445 IIRQLACQSIVLALKKLEKVSTFYDQKGWRNEKTILLNEFHTRIP-------DLPIFVS------ 496

  Fly   613 VNVLESLSITLDLVMLLCKENRAFVNKTSQILDYLDVLRP-LYETDFDKLNQPEELLKIQLELKS 676
                     ||...:...|:||......|.|.:|...:.| |:..:....|...:::: :.::..
Yeast   497 ---------TLSNSLASNKDNRILPLSISIIFNYYSKMFPNLFSINLPSSNIYTDIMQ-KSKISG 551

  Fly   677 IKTILL---LFPHSLNPTQPLFGNVFK--SFIKAYMLEEKSIKSESGNILSRLFQNTGMFDSCRH 736
            |:..:|   |.....|.||..:.|...  :.:...:|:..|.|:.|..|.:|:   :.:.|....
Yeast   552 IEFAILDNYLQFQEFNSTQTRWWNPSSGGNSLFTLLLKLASSKNASNVITTRI---SNLLDELTR 613

  Fly   737 EINIWIEALIGFGPATVTNVVEILLTILCLD-----WRQIELPEQSVTDTAIITKNLSKLFAQI- 795
            ...|:..:||....|.|.::..:.|.:..:|     |:..:.....|..|.....:::|.:..| 
Yeast   614 TNVIFNISLISPVMALVNSLQGLSLQVSEIDNMEQVWKWFDETISRVVKTPYKYVDMAKEYNYIS 678

  Fly   796 -------EQGQTVQAYVETLTLSKMMPLLLKG-VELEEPY---DEYVELVFVLLFHYHSKPEIVL 849
                   ||.:.|........|.|.:.|.|:. :.:.|.:   |:.|:.||..:..:.....:.|
Yeast   679 PFIMCLSEQWKYVDKSGNPEFLIKWLILFLRNMIFIGEDHIGIDKLVKNVFPEVSDHDVNIYLKL 743

  Fly   850 QMYEDNLSKHTN-------YMK--------SWLPGEGNGKPKKLPHLIFDKWPLLKQMRKVSTES 899
            ..:|:|:.| ||       .||        |.||.:......:||....|...:|.:: ::..|.
Yeast   744 DSFEENIKK-TNSSNSLISSMKSSSFFQYISALPSKNLMNISRLPVNKLDAAGILFRV-QLLVED 806

  Fly   900 ENMSFEQVFK--------------MDDTENNFELQLEEGQTMLLHSSLGNPRRNMIYVQDLLFVF 950
            :::.::..|:              :.|||......||......| ..|...:||.:.::...|:.
Yeast   807 DSVVYDNWFEATACELTGKIASYMVTDTEFPIIKVLERYINFAL-PKLAIEKRNALLMKKSRFMC 870

  Fly   951 SHFFTSQKLSKPQAELTADFLIKFLQIASQV----DGPEEVQESDDEQQDEN---FTQSMLHYIF 1008
            :       |.......|...|::|.:|..:|    :..||....::..|.|:   |..|:..|:.
Yeast   871 N-------LIGAVCFETGHQLVEFREIIQKVVFSGENVEEYANYNELYQKEDVNAFLTSVSEYLS 928

  Fly  1009 NHRLWQLHPTELL--SETSESRLNYVIFLRRLMEHCRSL-----PRFETYTANYRLHLIKTLDIA 1066
            ...|     |.||  |...||..|   .|::|....:::     .......||.....||.::|:
Yeast   929 TSAL-----TSLLMCSTKLESTRN---ILQKLFNEGKTIKISLVKNILNKAANEDPASIKEVNIS 985

  Fly  1067 L-----------DTPVDQLGNQQQLDECVKLVDSFEFNSDQCSQMLDLLTTKVQAKDCIPNGKPN 1120
            |           |...|.:| :..|.|...|::|| .:||     |:.|..|...       :..
Yeast   986 LAKFFEENKVCVDASSDPMG-KLSLSETTSLINSF-VSSD-----LNYLVLKAFY-------RWE 1036

  Fly  1121 HY-FDLLLRLLGRLNTLKEPIDCGKSFKLILTFYKDFGELNEQQLEPFELAVLEFLLNYHHHMDE 1184
            |: |...:..:.|:.  ..|:      ..|:|....|..:.::....|.          |..:.:
Yeast  1037 HFSFPSFIPSIWRIK--DSPL------LSIVTTAALFKHMQDKDFSAFA----------HETISK 1083

  Fly  1185 CDSEFFACFFTSSRKLSKSAIRLACLLLERQPRLAETFAELLPSNLEQKDLVYPLLDIALTKNYQ 1249
            ..:|.....:|:|:                    :|.|.|:|       :::...:|.     |.
Yeast  1084 YGNEIAKSTYTTSK--------------------SEIFDEIL-------NMITTYIDF-----YD 1116

  Fly  1250 IPLPVLQRCYQTYKNGFMKSIEKPQKAALIYREHSEASALLIALCMPKSECFDYCQKQLKLDSVE 1314
                      :|.:|..:|.:       |...:|...:|.:..:....:  |.|...:..|....
Yeast  1117 ----------ETKRNEILKCV-------LSQSDHKYHAATVRYIAAHNN--FTYPGVETWLHKTL 1162

  Fly  1315 LFQVRVLREIYWQGFAAAKDEKQKATVFVNYINLNVQLLALDLKKQALDL----PKLEQISWNCY 1375
            |:..:.|.|           .|..:..|...:....:||.|:.....|::    .:||.|     
Yeast  1163 LYLTKYLSE-----------RKVISNSFFELLRAMAELLKLEEVPNKLNVKIINSQLEAI----- 1211

  Fly  1376 EWWKTNRTDDLPLDWSRLQKNPQW---LNFCKSSLKLALHLGEERLPLQDETNGLVLKLMAFLCD 1437
                      |..:|.:..|..::   |.||.|...:......:.|...|..:.:::|       
Yeast  1212 ----------LGSEWIKQIKVLEYVIVLIFCVSKKSIQSQRMVQLLLSNDSYSSIMIK------- 1259

  Fly  1438 GMYDEYKEDAQQEEDATPTLLYEMICTHSCCFDHLLGKPSETKTHILHLMEVLARKAPSALQSDH 1502
                :..||:...:..:..:|:.                       |..::.:....|...:.  
Yeast  1260 ----DNDEDSSYRKFLSTMILFS-----------------------LFSIDPVVNSTPIVQEK-- 1295

  Fly  1503 IPVILGSYHAKLSPADRYGLALLEHYERFDVGLDKFRPFIWGESAVAHYALRAADEDV-----RT 1562
               :|..|...:|..|:..|.:||       .::......|.....:...::..:|::     .|
Yeast  1296 ---LLTFYSGTISSNDKLILKILE-------TIESHTATSWTNMIFSWEFIKDEEEEILEAIGDT 1350

  Fly  1563 RLQQQETNVAQVLALIVRETSEYTIENFPIWRSLHASQQLPSTEFQNPAKKSMSFGDNQLEQMVE 1627
            ||..:|           ||....|::.                              |.:::.::
Yeast  1351 RLITKE-----------REGLILTLQK------------------------------NMIKKSID 1374

  Fly  1628 QGQLDFPQ-------------DLRRICPKRETIYE-------TCYDPAFLLPLMMH-------CF 1665
            :..|:.||             |....|...:..|:       ..|||.|||.|::|       ..
Yeast  1375 RYVLERPQVPELYTDSNTNNYDATTRCDLVKKYYDDTERSGVDMYDPLFLLLLIIHNKELVKMVK 1439

  Fly  1666 APESVVWARWPVQNGL----LAITFCGLSSLDKDMRLA------AASCQQRYRAHFELSNFYERP 1720
            ..|..|..|:..:|.|    .....|.||.......::      .||..::..|...|    |:.
Yeast  1440 DDEGNVTYRYEFENFLDCKIFQFIICSLSDCHTVANISYEHLSNLASSLEKKTAQMNL----EKQ 1500

  Fly  1721 LWTQAYENIQAGLADLRNSWLAQ--------RRTHGGTPRVPLIPGLFIAHSFNLSTEPTHLLYK 1777
            :.::..|..::....::.:.:.|        :|.....|..||| ...|:...:|...||..|::
Yeast  1501 ITSKDNERKESDSDLIKYNSIYQVLIKRILYQRQQNQDPINPLI-WFSISRIVDLLGSPTAPLHE 1564

  Fly  1778 RLMMYLRLKQSFNFQTIPDFN--VFFYSQEPEHQQYREFIVELLRCGIKCSADLFLLVSTNTFKV 1840
            :...::....:.....||..:  :..|::..:....:|..:|:                      
Yeast  1565 KAYRWVLSNSTIRSWDIPMVSDVMMSYNKRQQDDNKKEIDMEI---------------------- 1607

  Fly  1841 LLGFYGSSLASLETNLLLLSVLSTCVKIPGAVKI-----MLEHVGILSWLVGVI---------RD 1891
               :||.          |..||:|..|   .:|.     |||..|:..||:.:|         |:
Yeast  1608 ---YYGE----------LSWVLTTICK---GIKTDEDYKMLEKKGVFEWLLNLINMPYLKERLRE 1656

  Fly  1892 TEFHQFDIIE--------------GVIS---ILNN 1909
            ..:..|..::              |::|   :|||
Yeast  1657 LIYFIFYKVQRVADDGGLNLISRNGIVSFFEVLNN 1691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12499NP_651044.1 Npa1 160..475 CDD:288544 60/351 (17%)
NopRA1 1682..1884 CDD:292818 37/222 (17%)
URB1NP_012911.3 Npa1 61..390 CDD:403035 69/394 (18%)
NopRA1 1460..1684 CDD:406583 43/266 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345005
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1791
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006129
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR13500
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1908
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.960

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