DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12499 and urb1

DIOPT Version :10

Sequence 1:NP_651044.1 Gene:CG12499 / 42637 FlyBaseID:FBgn0038968 Length:2059 Species:Drosophila melanogaster
Sequence 2:NP_001313374.2 Gene:urb1 / 100536352 ZFINID:ZDB-GENE-030131-5181 Length:2234 Species:Danio rerio


Alignment Length:2366 Identity:485/2366 - (20%)
Similarity:843/2366 - (35%) Gaps:640/2366 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 TKESFDESTLESTETDPADSTPSKKKSKKTKTSDTSVEQQVEVEMAEDEISRDSGIDPEESRIHF 111
            ||...:|:..||.           .|:||.||.::.....|...|.:|......|          
Zfish     3 TKRENEENITESV-----------TKAKKGKTDESEFSGTVFKSMLKDSSEAQKG---------- 46

  Fly   112 PNDFKMMHFRTKLRGNNFITELRHFLHMCSTTRPKLAAKYIEKRGK---PLELAEAFERIDKTN- 172
                                 |..|:.:..|.  ..|..|....|.   ..|.:|.|..:|:.. 
Zfish    47 ---------------------LATFIRVAKTL--PCAELYDVVEGYIKISAECSEIFALLDEEKP 88

  Fly   173 ------LFHVDYLTEALHRVLMEILTNQKSHMESAVHGCRYFLKVHGGVLENQMKSMQLGHRRNA 231
                  :|      :.|..:|:...::.........:..|..:..|..:|::.:.|......|..
Zfish    89 EKEMMLIF------QCLEMILLRTASDLSQFSMVGANIVRRIVSKHMTLLQSSLYSKNYRFVRQC 147

  Fly   232 LKLLTAIVCVEPQLARQVLNSYDVLSNVTVTQKLLS-HEKSEYQCEDTVRKAFILFILAFLVEGN 295
            |.||:|:|......||      ||...:...:.|.. ..|.:...:..||.|||.|:|:||:.|:
Zfish   148 LSLLSALVSQSADAAR------DVFGQMQFGKDLCQLARKRDKSGKSDVRMAFIQFVLSFLMSGD 206

  Fly   296 TLLIRNILDRGQLIGVLAKGLVYDDHVTVCVVLNALRQYVLENPEIQKTKKVLVFDLECCKNLRR 360
            ...|..|||..:|..:|..||..|....:.::|:.|:..|::|..|.||:||..|.......:..
Zfish   207 NTTIGQILDTKELSEILNSGLKEDRLSIINLILSTLQTKVVQNKTITKTQKVRFFSASILAQIAS 271

  Fly   361 LYDWEGPMGLKV-----MFAKSKHVSKIPPNPQEAEAVSAAVHELLLVLLTSRKHGICF--DAMT 418
            ||.|.|.:.:.|     :....||:.:            ..||..|:.|..||||||.|  .::.
Zfish   272 LYRWNGIVDVSVDEEEKVEEGGKHIMR------------ELVHNFLMDLCCSRKHGISFHDPSLG 324

  Fly   419 HYRQKQNKLQGRLLGSLFKPYDNPRKVDLVIQTLTACPDL---------------GRNTVRNCSS 468
            ...:..|.:..:.|..|.:..::....:||:..|...||:               ...|.::..|
Zfish   325 TAGKVGNLVLLQFLVRLKQATEDEMVAELVVNVLKGSPDILNRYFKETQCSFAPRNNKTWQDNIS 389

  Fly   469 LL------SPVKTKPKDLPIAVAF---LAQI-INAVPP-----------SALSAAFDKMTLTDFS 512
            ||      .||.:|...:...|.|   |:.: :.::||           :..|......||:..:
Zfish   390 LLKKIYEVQPVVSKAFQMNEMVPFPRLLSMVLVTSLPPVCNKVFFTQGLNVHSLVVQHTTLSLLA 454

  Fly   513 FWIK------ELCLPIEALLHITGKKY---LSDPDFNL-RLAVLRLLLSMMKQYSNYMNAIAVRE 567
            |.:|      |.||  :..:..|...|   :.:....| |.|:.::|..|:...|.:......:|
Zfish   455 FILKRAQQNIEYCL--DRTVWETSDIYSPAMMEEFVQLYREALSKILPDMVSIVSIWQLHSKEKE 517

  Fly   568 QSKKAGNSLRKFKFDLLNHLLVHFPTIESILYSLYMFIKQKNVEGVNVLESLSITLDLVMLLCKE 632
            .:.|..|..:|...:.......|...::::|..: |.:.||.|..: |.:|   ..|...||   
Zfish   518 DAAKMKNRKQKQSQEHSQQDDPHLILVKALLLQV-MCLYQKVVPHL-VTQS---RFDFSKLL--- 574

  Fly   633 NRAFVNKTSQILDYLDVLRPLYETDFDKLNQPEELLKIQLELKSIKTILLLFPHSLNPTQPLFGN 697
             :..|.::....:...||:             .::|::.|||.:.|..........||.   |..
Zfish   575 -KGIVTESGMTQEVPPVLQ-------------YQILQLALELPASKFSWFRVQEMANPD---FEK 622

  Fly   698 VFKSFI----KAYMLEEKS-IKSESGNILSRLFQNTGMFDSCRHEINIWIEALIGFGPATVTNVV 757
            ..||.|    |.::....| :|:.|..::.::.:::|:|:....|:.:|::.|...|.:....|:
Zfish   623 GEKSVIYLLLKMFVSSNNSYLKTSSRMLVLKVLRDSGVFEHTWKELALWLDHLTTLGLSQQETVI 687

  Fly   758 E----ILLTILCLDWRQIELPEQSVTDTAIITKNLS---------------------KLFAQIEQ 797
            :    :|..::|......:.....|.:.|.:..|||                     .:..:..:
Zfish   688 QFLDHVLTRVVCNSHVYTDKAASMVQEAANLQANLSGQDGDEASIPISHIDDVLDMVDVIVESSE 752

  Fly   798 GQ--------TVQAYVETLTLSKMMPLLL-------------KGVELEEPYDEYVELVFVLLFHY 841
            |.        |....::|...|.::|.:|             |||     ..||:..|...:.|.
Zfish   753 GDIEEIGPSLTEDIILQTFPFSAVVPAVLEARNKLPDSFKNAKGV-----LYEYMAAVLCDVLHC 812

  Fly   842 HSKPE---IVLQMYEDNLS-------KHT------NYMKSWLPGEGNGKPKKLPHLIFDKWPLLK 890
            ...|.   :.||.|:..||       .|.      :|...||       ||...|.:|..     
Zfish   813 QRDPLALCLTLQHYDKELSTSDAASTPHASVVSFYHYYSQWL-------PKNTHHTLFIS----- 865

  Fly   891 QMRKVSTESENMSFEQVFKMDDTE-------NNFELQLEEGQTMLLHSSLGNP---RRNMIYVQD 945
              ...:....:..|..:.|...||       .:|:..|:|....|..|.:  |   .:.::|:::
Zfish   866 --ESFTDGGSHADFTALLKTSFTEGANAFLRTSFKEALQEALATLTVSRI--PVAVNQVLLYLRN 926

  Fly   946 LLFVFSHFF---TSQKLSKPQAELTADFLIKFLQIASQVDGPEEVQESDDEQQDENFTQSMLHYI 1007
            .:..|:...   .::.||.....|.| .::|.|  :|....|.|.:.:....:|..|        
Zfish   927 YVLNFNMLLKETAAEVLSSLMMVLNA-LILKLL--SSDTHTPVESESAGQHDEDALF-------- 980

  Fly  1008 FNHRLWQLHPTELLSETSESRLNYVIFLRRLMEHCRSLPRFETYTANYRLHLIKTLDIALDT--- 1069
                   |...::.:|.::.:...:..|:.:.:|    |..|.:.            :||:.   
Zfish   981 -------LDTNQVPAENTDKQQIVLAVLKSVFKH----PAVEQWF------------LALELSSF 1022

  Fly  1070 PVDQLGNQQQLDECVKLVDS----FEFNSDQCSQM--LDLLTTKVQAKDCIPNGKPNHYFDLLLR 1128
            |...|...:....||.|.:.    .|.::|....:  |:|::|               |.....|
Zfish  1023 PPHSLNPVRLKQLCVCLTEMTLLLLESSADTLRDLDALELIST---------------YLTSAQR 1072

  Fly  1129 -LLGRLNTLKEPIDCGK----SFKLILTFYKDFGELNEQQLEP--FELAVLEFLLNYHHHMDECD 1186
             :|..|..:|.  :|.|    |.:.:|..        ::.:||  |:..|...||....|:...:
Zfish  1073 AVLRELQEMKS--NCPKKESLSVRALLAL--------QEYIEPSSFKEVVSTLLLLPQKHLLAPE 1127

  Fly  1187 SEFFACFFTSSRKLSKSAIRLACLLLERQPRLAETFAELLPSNLEQKDLVYPLLDIALTKNYQIP 1251
            ::......|..:.||.|        |:|...::.:...|.|::|:....::........:::.  
Zfish  1128 NQLSVYGRTVQKLLSDS--------LKRSSAVSSSCVTLSPAHLQGLAALFTSCQCVQLEDFL-- 1182

  Fly  1252 LPVLQRCYQTYKNGFMKSIEKPQKAALIYREHSEA---SALLIALCMPKSECFD-YC-----QKQ 1307
            |.||.|     :.|..|.|:.......|.||...|   ..:|:..|......|: :|     |||
Zfish  1183 LQVLSR-----EPGTAKLIQTDILLHCIQRESPSAQDIGVVLLENCSTHVLSFELWCLDPSNQKQ 1242

  Fly  1308 LKLDS------------------------VELFQVRVLREI----YW----QGFAAAKDEKQKAT 1340
            :.:.:                        |:...::||:..    .|    ||.|..     :..
Zfish  1243 ISVQNGSFLFLLNSYLKRATADDPTRPKDVQKSVLKVLKNALMAELWHTVQQGEAGV-----RTA 1302

  Fly  1341 VFVNYINLNVQLLAL--DLKKQALDLPKLEQISWNCYEWWK------TNRTDD------------ 1385
            :.|..::..::|.|:  ||.:...|||.:.. ..:.||.||      ....||            
Zfish  1303 LHVEVLSSLIRLAAVNSDLIQLIKDLPAILH-KPDIYERWKLADSISEKLCDDSEELHQWRKSLL 1366

  Fly  1386 -LPLDW----SRLQKNPQ----------------------------WLNFCKSSLKLALHLGEER 1417
             ..|.|    .:.||.||                            |..|.||.||...|     
Zfish  1367 SAALVWLTAVYKKQKEPQSNHEESMLTRLRSLLLGQIFPENMTASDWNAFVKSGLKYRYH----- 1426

  Fly  1418 LPLQDETNGLVLKLMAFLCDGMYDEYKEDAQQEEDATPTLLYEMICTHSCCFDHLLGKPSE---- 1478
                 :.|  .|:.:..|.:.:||  ..|..:|.....| ::.|..|||.....:|...::    
Zfish  1427 -----DCN--FLETLNSLVEVIYD--TPDTPKEMLPVAT-IHMMTTTHSLFLPTMLAIDTDSLRL 1481

  Fly  1479 TKTHILHLMEVLARKAPSALQSDHIPVILGSYHAKLSPADRYGLALLEHYERFDVGLDKFRPFIW 1543
            :|..::.|:..|.||:|.....:|..|:||:|.|.||..|:..|.:|:.||:.::.|.:|:..:|
Zfish  1482 SKESLVSLLLTLVRKSPEVCNVNHFLVLLGAYEASLSTTDQKLLLVLQEYEKNNISLAEFQFVLW 1546

  Fly  1544 GESAVAHYALRAADEDVRTRLQQQETNVAQVLALIVRETSEYTIENFPIWRSLHASQQLPSTEFQ 1608
            |.:||.|:..|   :.:...|.|:.|: ..:|:|:..:....|:.:||..|.:     :|.    
Zfish  1547 GPAAVEHHKTR---KSLGPSLWQKPTS-EHLLSLLSADRMLNTVTHFPQRRYI-----IPQ---- 1598

  Fly  1609 NPAKKSMSFGDNQLEQMVEQGQLDFPQDLRRICPKRETIYETCYDPAFLLPLMMHCFAPESVVWA 1673
              ..|:|.:.        ::|             ||.....:.|||.|||||......||..|..
Zfish  1599 --VNKTMIYS--------QEG-------------KRSVDLSSLYDPCFLLPLFSFILRPECAVDC 1640

  Fly  1674 RWPVQNGLLAITFCGLSSLDKDMRLAAASCQQRYRAHFELSNFYERPLWTQAYENIQAGLADLRN 1738
            ...|....|.:|...|||.|..:|.||......:..|.|.:.|.|:.......:.::.|:     
Zfish  1641 LKFVSCQALGVTMAALSSYDSKVRAAAYQVLGSFYQHLEGARFKEKRQLLYLLDTVKNGI----- 1700

  Fly  1739 SWLAQRRTHGGTPRVPLIPGLFIAHSFNLSTEPTHLLYKRLMMYLRLKQSFNFQTIPDFNVFFYS 1803
                |::    ..|||.:...:||........|...:|..:..:|...|..:.:.:|||...|||
Zfish  1701 ----QKQ----NLRVPFVHVAYIAKVAQQILRPEEHMYMVVSRFLLGTQFLDLKRVPDFFKLFYS 1757

  Fly  1804 QEPEHQQYREFIVELLRCGIKCSADLFLLVSTNTFKVLLGFYGSSLASLETNLLLLSVLSTCVKI 1868
            .|.||:..||:|:.:|..|:...:...|......::.||.|..:||....|.:.::.||....::
Zfish  1758 FELEHKLEREWILSVLEEGVWDQSCYELCEMQRIYQTLLAFASTSLCDQATQIQIVRVLRQTARV 1822

  Fly  1869 PGAVKIMLEHVGILSWLVGVIRDTEFHQFDIIEGVISILNNLWY---------ALAASRSE---- 1920
            ..|..|:.:..|:|:|:|.:| :..:....::..||.:|:.||:         |.|:|.|.    
Zfish  1823 NRAAYILTKEHGVLTWIVQLI-EKRYVDSKLLSSVIELLHALWFTNLGDKESKAEASSTSSEQPQ 1886

  Fly  1921 ------------------LTDYDHIQLRVYRLVLQLLPLLSPRISVPGLGRLFNVLWKTGSACGQ 1967
                              ||...|::..|..|.||..           |..|.:||...|:|...
Zfish  1887 TSGKCLPLPIINEFLCTLLTVIRHLRSGVSSLQLQQF-----------LHTLSSVLVHCGTAMNA 1940

  Fly  1968 HR----------AVSATQMDTLLECVSRQWPDQLASVRYVRSFGSA------------------- 2003
            ::          .:|.:::.:||:    :|    .::.:..|..||                   
Zfish  1941 YKEAGWLTLHPHKLSCSEVLSLLQ----RW----TALSHDASLASALQTVGNKHKVKELMGSGRE 1997

  Fly  2004 ---GACSRSEYC-----------------------------DWLAKDQKLET---------PAVL 2027
               |.|..:::.                             .|..|:::|.|         ||..
Zfish  1998 KGQGKCHSTKHAPMEKQTENAEVLDQAVLDECKPHLRNILLHWEPKEKELSTSTSQTVSDKPASS 2062

  Fly  2028 ALSSLREYVI-DWAQAHKSESDGETK 2052
            .||:....|| .||....:||..:.|
Zfish  2063 GLSNTTACVIFKWALKTLTESRFDDK 2088

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12499NP_651044.1 Npa1 160..472 CDD:463325 82/347 (24%)
NopRA1 1682..1884 CDD:465063 51/201 (25%)
urb1NP_001313374.2 None

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