DRSC/TRiP Functional Genomics Resources

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Protein Alignment pinta and AT1G30690

DIOPT Version :9

Sequence 1:NP_001287466.1 Gene:pinta / 42635 FlyBaseID:FBgn0038966 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001031119.1 Gene:AT1G30690 / 839949 AraportID:AT1G30690 Length:540 Species:Arabidopsis thaliana


Alignment Length:278 Identity:59/278 - (21%)
Similarity:98/278 - (35%) Gaps:70/278 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SSKRQVATTDGDPERVLAQVQDLSD-----------WLVANPQINGCNTFENLHF-FLRTSKFDV 59
            :.:.:..|.|...|.|.|:..::.|           |.|......|..:.:.:.. |||...|.|
plant   170 TKEEEKKTEDVVTEEVKAETIEVEDEDESVDKDIELWGVPLLPSKGAESTDVILLKFLRARDFKV 234

  Fly    60 ERAKKKLKTFYQMRAERTEWFDNRDPQL--PEIQDLLKLGVFLPIGPDAEQRMVVVIRTAAHDPK 122
            ..|.:.||...:.|.:      |:...:  .|..:.|....::. |.|.|...|..   ..|..:
plant   235 NEAFEMLKKTLKWRKQ------NKIDSILGEEFGEDLATAAYMN-GVDRESHPVCY---NVHSEE 289

  Fly   123 LH----SQNNVFKTSKMILDLL------LKLDPETCARGMVAILDMQGVQLGHALQMNPKLIKRS 177
            |:    |:.|..|..:....|:      |.|.|    .|:.::|.:      |.|:..|.:.:  
plant   290 LYQTIGSEKNREKFLRWRFQLMEKGIQKLNLKP----GGVTSLLQI------HDLKNAPGVSR-- 342

  Fly   178 VESWTAYPCQPKLLEF--TNAPRHV--NFFLN----------TFRIFMTPKIRSRLFVRREG--- 225
            .|.|...   .|::|.  .|.|..|  |.|:|          ....|:|.:.:|:..|.|..   
plant   343 TEIWVGI---KKVIETLQDNYPEFVSRNIFINVPFWFYAMRAVLSPFLTQRTKSKFVVARPAKVR 404

  Fly   226 ----TSVSCDQLPKELGG 239
                ..:..|:||.:.||
plant   405 ETLLKYIPADELPVQYGG 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pintaNP_001287466.1 SEC14 87..240 CDD:238099 40/186 (22%)
AT1G30690NP_001031119.1 CRAL_TRIO_N <219..244 CDD:215024 8/24 (33%)
SEC14 273..422 CDD:214706 36/166 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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