DRSC/TRiP Functional Genomics Resources

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Protein Alignment pinta and Clvs1

DIOPT Version :9

Sequence 1:NP_001287466.1 Gene:pinta / 42635 FlyBaseID:FBgn0038966 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001342112.1 Gene:Clvs1 / 74438 MGIID:1921688 Length:354 Species:Mus musculus


Alignment Length:231 Identity:53/231 - (22%)
Similarity:102/231 - (44%) Gaps:11/231 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DPERVLAQVQDLSDWLVANPQINGCNTFENLHF-FLRTSKFDVERAKKKLKTFYQMRAERTEWFD 81
            :|:.:...:|.:.|.::..|.|....|.:.... |||..||....|.:.|..::|.|....:.|.
Mouse    45 NPDILHQDIQQVRDMIITRPDIGFLRTDDAFILRFLRARKFHQADAFRLLAQYFQYRQLNLDMFK 109

  Fly    82 NRDPQLPEIQDLLKLGVFLPI--GPDAEQRMVVVIRTAAHDPKLHSQNNVFKTSKMILDLLLKLD 144
            |.....|.|:..|..| |..:  ..|...|.::::..|..|...:|..::.:...:.|::|:: |
Mouse   110 NFKADDPGIKRALIDG-FPGVLENRDHYGRKILLLFAANWDQSRNSFTDILRAILLSLEVLIE-D 172

  Fly   145 PETCARGMVAILDMQGVQLGHALQMNPKLIKRSVES-WTAYPCQPKLLEFTNAPRHVNFFLNTFR 208
            ||....|.:.|:|........|.::.|.::|.::|. ..::|.:...:.|.|.|.:::......:
Mouse   173 PELQINGFILIIDWSNFSFKQASKLTPSILKLAIEGLQDSFPARFGGVHFVNQPWYIHALYTLIK 237

  Fly   209 IFMTPKIRSRLFVRREGTS-----VSCDQLPKELGG 239
            .|:..|.|.|:|:.....:     :..:.||.|.||
Mouse   238 PFLKDKTRKRIFLHGNNLNSLHQLIHPEFLPSEFGG 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pintaNP_001287466.1 SEC14 87..240 CDD:238099 36/161 (22%)
Clvs1NP_001342112.1 CRAL_TRIO_N 51..97 CDD:215024 12/45 (27%)
CRAL_TRIO 125..274 CDD:366224 33/151 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..354
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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