DRSC/TRiP Functional Genomics Resources

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Protein Alignment pinta and clvs2

DIOPT Version :9

Sequence 1:NP_001287466.1 Gene:pinta / 42635 FlyBaseID:FBgn0038966 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001020716.1 Gene:clvs2 / 566769 ZFINID:ZDB-GENE-041014-313 Length:329 Species:Danio rerio


Alignment Length:263 Identity:61/263 - (23%)
Similarity:121/263 - (46%) Gaps:21/263 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DPERVLAQVQDLSDWLVANPQINGCNTFENLHF-FLRTSKFDVERAKKKLKTFYQMRAERTEWFD 81
            :|:.:...:|::.|.::..|.|....|.:.... |||..||:...|.:.|..:::.|.:..:.|.
Zfish    23 NPDTLHQDIQEVRDMIITRPDIGFLRTDDAFILRFLRARKFNHFEAFRLLAQYFEYRQQNLDMFK 87

  Fly    82 NRDPQLPEIQDLLK---LGVFLPIGPDAEQRMVVVIRTAAHDPKLHSQNNVFKTSKMILDLLLKL 143
            |.....|.|:..||   .||...:  |...|.::|:..|..|...::..::.:...:.|:.::: 
Zfish    88 NLKATDPGIKQALKDGFPGVLSNL--DRYGRKILVLFAANWDQSRYTFVDILRAILLSLEAMIE- 149

  Fly   144 DPETCARGMVAILDMQGVQLGHALQMNPKLIKRSVES-WTAYPCQPKLLEFTNAPRHVNFFLNTF 207
            |||....|.|.|:|........|.::.|.:::.::|. ..::|.:...:.|.|.|.:::......
Zfish   150 DPELQVNGFVLIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPARFGGIHFVNQPWYIHALYTVI 214

  Fly   208 RIFMTPKIRSRLFVRREGTSVSC-------DQLPKELGGQGLSYMELSVKWKQLVEENADFYVEQ 265
            |.|:..|.|.|:|:  .|.:::.       :.||.||||. |...::.. |.:.:.::|  |.|:
Zfish   215 RPFLKDKTRKRIFM--HGNNLNSLHQLILPEILPSELGGM-LPPYDMGT-WARTLLDHA--YDEE 273

  Fly   266 DKY 268
            ..|
Zfish   274 TDY 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pintaNP_001287466.1 SEC14 87..240 CDD:238099 38/163 (23%)
clvs2NP_001020716.1 CRAL_TRIO_N 29..75 CDD:215024 12/45 (27%)
SEC14 106..251 CDD:238099 33/149 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 293..329
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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