DRSC/TRiP Functional Genomics Resources

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Protein Alignment pinta and ttpal

DIOPT Version :9

Sequence 1:NP_001287466.1 Gene:pinta / 42635 FlyBaseID:FBgn0038966 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001016176.1 Gene:ttpal / 548930 XenbaseID:XB-GENE-976635 Length:338 Species:Xenopus tropicalis


Alignment Length:258 Identity:73/258 - (28%)
Similarity:111/258 - (43%) Gaps:22/258 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 PERVLAQVQDLSDWLVAN-PQINGCNTFENLHFFLRTSKFDVERAKKKLKTFYQMRAERTEWFDN 82
            ||..|..||.|.|.:..: |.:........|..|||..|||.:||.:.|..:|..|....|.|.:
 Frog    48 PEWRLRDVQALRDMVWKDYPHLKTRVDDSFLLRFLRARKFDYDRALQLLVNYYSCRKAWPEVFTD 112

  Fly    83 RDPQLPEIQDLLKLGVFLPIGP--DAEQRMVVVIRTAAHDPKLHSQNNVFKTSKMILDLLLKLDP 145
            ..|.  .::.:|..| ||.:.|  |.|.|.:|.||.....|:.:......:...:.|:.|::.: 
 Frog   113 LRPS--AVKPVLDSG-FLTVLPHTDTEGRRIVCIRPGCWIPRDYPITENIRAIYLSLEKLVESE- 173

  Fly   146 ETCARGMVAILDMQGVQLGHALQMNPKLIKRSVE-SWTAYPCQPKLLEFTNAPRHVNFFLNTFRI 209
            ||...|:|.:.|..||.|.||....|.:.|:.:. ....:|.:.|.:...|.||   .|...|.|
 Frog   174 ETQVNGIVILADYNGVGLTHASHFGPFIAKKVIGILQDGFPIRIKAVNVINEPR---IFKGIFAI 235

  Fly   210 ---FMTPKIRSRLFVRREG-----TSVSCDQLPKELGGQGLSYMELSVKWKQ-LVEENADFYV 263
               |:..||..|.|:....     .::....||:|.||.. ..:: :..|.| |::...||.|
 Frog   236 LKPFLKEKIVKRFFLHGSDLNSLHANIPKSILPEEYGGTA-GKLD-TTAWSQILLDSEEDFAV 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pintaNP_001287466.1 SEC14 87..240 CDD:238099 43/163 (26%)
ttpalNP_001016176.1 CRAL_TRIO_N 53..99 CDD:215024 15/45 (33%)
SEC14 119..274 CDD:238099 43/159 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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