DRSC/TRiP Functional Genomics Resources

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Protein Alignment pinta and ttpa

DIOPT Version :9

Sequence 1:NP_001287466.1 Gene:pinta / 42635 FlyBaseID:FBgn0038966 Length:273 Species:Drosophila melanogaster
Sequence 2:XP_012820030.1 Gene:ttpa / 493547 XenbaseID:XB-GENE-953693 Length:285 Species:Xenopus tropicalis


Alignment Length:230 Identity:68/230 - (29%)
Similarity:109/230 - (47%) Gaps:19/230 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 FLRTSKFDVERAKKKLKTFYQMRAERTEWFDNRDPQLPEIQDLLKLGVFLPI-GPDAEQRMVVVI 114
            |||...|.:|.|.|.||.:::.|||..|...:..|.  .|.||.:.|....: ..|.....|::.
 Frog    55 FLRARDFCIELAFKLLKNYHKWRAECPEITADLRPS--PILDLFRAGYHAVLRSRDDSGSKVLIY 117

  Fly   115 RTAAHDPKLHSQNNVFKTSKMILDLLLKLDPETCARGMVAILDMQGVQLGHALQMNPKLIKR-SV 178
            |....||||.:...||:.|.:..:|::: :.||...|:.||.|:||.:|.||.|:.|.:.|| :.
 Frog   118 RIEYWDPKLFTAYEVFRVSLITSELIVQ-EAETQRNGIKAIFDLQGWRLAHAFQITPTMAKRIAA 181

  Fly   179 ESWTAYPCQPKLLEFTNAPRHVNFFLNTFRI---FMTPKIRSRLFVRREGTSVSCDQ------LP 234
            ....::|.:.:.:...|.|.   ||...|.|   |:..||:.|:.:.......:.:|      ||
 Frog   182 VMADSFPLKVRGVHLINEPL---FFHPVFAIIKPFLPDKIKQRVHMHGSNYIPTLNQHFSTSILP 243

  Fly   235 KELGGQGLSYMELSVKWKQLVEENADFY--VEQDK 267
            .|.||.|.:..||..:|...:..:.|:.  :.|:|
 Frog   244 PEYGGTGPAMSELCEEWTAHIMSSEDYLLSISQNK 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pintaNP_001287466.1 SEC14 87..240 CDD:238099 46/163 (28%)
ttpaXP_012820030.1 CRAL_TRIO_N 27..73 CDD:215024 9/17 (53%)
CRAL_TRIO 99..249 CDD:366224 43/153 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1053004at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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