DRSC/TRiP Functional Genomics Resources

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Protein Alignment pinta and CG11550

DIOPT Version :9

Sequence 1:NP_001287466.1 Gene:pinta / 42635 FlyBaseID:FBgn0038966 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_651882.1 Gene:CG11550 / 43731 FlyBaseID:FBgn0039864 Length:298 Species:Drosophila melanogaster


Alignment Length:292 Identity:73/292 - (25%)
Similarity:116/292 - (39%) Gaps:62/292 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 PERVLAQVQDLSDWLVANPQINGCNTF---ENLHFFLRTSKFDVERAKKKLKTFYQMRAERTEWF 80
            ||....:|....||:.|.|.|:  :.|   |.|||| ...::.:|.||:.|.|....|....|:|
  Fly    14 PEIRRPEVLKFLDWIHAQPHIS--DRFSEGEALHFF-HACRYSMEVAKQVLDTNLTARTHLEEFF 75

  Fly    81 DNRDPQLPEIQDLLKLGVFLPIGPDAEQRMVVVIRTAAHDPKLHSQN--NVFKTSKMILDLLLKL 143
            .|.|.:.|||:..::....:|: |.|......||.....|....:.|  :|.|...|:.|..:..
  Fly    76 VNLDCERPEIRRAMRTVSIVPL-PGATPEGYRVILAKLDDLNTSNYNFADVMKLYCMVFDFWMYE 139

  Fly   144 D---PETCARGMVAILDMQGVQLGHALQMNPKLIKRSVESWTAYPCQPKLLEFTNAPRHVNF--- 202
            |   |     |.|.::|::...|||..::....:|:.:          ..|:...|.|.:.|   
  Fly   140 DGIQP-----GHVIVIDLKNTSLGHVARIGLLQMKKFL----------YYLQEAAAIRLIGFHFI 189

  Fly   203 ----FLNTFRIFMTPKIRSRLFVRREGTS--------------VSCDQLPKELGGQ--------G 241
                |::.....|||      |:::|.|:              |..:.||||.|||        .
  Fly   190 NIVPFMDKILALMTP------FMKKELTTVLHMHSDLKEFYKFVPQEMLPKEYGGQLEEANVAKE 248

  Fly   242 LSYMELSVKWKQLVEENADFYVEQDKYKSKLK 273
            :.|.:|....|:::|......|.:.....|.|
  Fly   249 IYYKKLLDNRKEMIEFETRHQVNEKLRPGKAK 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pintaNP_001287466.1 SEC14 87..240 CDD:238099 40/178 (22%)
CG11550NP_651882.1 CRAL_TRIO 94..239 CDD:279044 37/166 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10174
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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