DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment pinta and retm

DIOPT Version :9

Sequence 1:	NP_001287466.1	Gene:	pinta / 42635	FlyBaseID:	FBgn0038966	Length:	273	Species:	Drosophila melanogaster
Sequence 2:	NP_001260132.1	Gene:	retm / 33899	FlyBaseID:	FBgn0031814	Length:	707	Species:	Drosophila melanogaster

Alignment Length:	277	Identity:	57/277 - (20%)
Similarity:	102/277 - (36%)	Gaps:	59/277 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly     6 SSSKRQVATTDGD-PERVLAQVQDL--SDWLVANPQINGCN------TFENLHFFLRTSKFDVER 61
            :|.::.....||| ..|.|.|:..:  |..|.....::|.:      :::.:..||....:.|.:
  Fly   196 ASDQQHSILLDGDFIARSLGQLSPMQESKLLELRKMLDGVDDLERVPSYQTILRFLAARDWHVSQ 260

  Fly    62 AKKKLKTFYQMRAERTEWFDNRDPQLPE-IQDLLKLGVFLPIGP------DAEQRMVVVIRTAAH 119
            |       |.|..:...|  .|:.::.. :.:..|..|.:...|      |.:.|.|.::|....
  Fly   261 A-------YAMLCDSLRW--RREHRIDALLAEYSKPAVVVEHFPGGWHHLDKDGRPVYILRLGHM 316

  Fly   120 DPKLHSQNNVFKTSKMILDLLLKLDPETCARGMVAI-----------------LDMQGVQLGHAL 167
            |.|     .:.|:..|  |.||:|....|..|:..|                 :|::|:.:.|..
  Fly   317 DVK-----GLLKSLGM--DGLLRLALHICEEGIQKINESAERLEKPVLNWSLLVDLEGLSMRHLW 374

  Fly   168 QMNPKLIKRSVESWTA-YPCQPKLLEFTNAPRHVNFFLNTFRIFMTPKIRSR-LFV------RRE 224
            :...|.:...:|:... ||.....:....|||...........|:....||: ||.      .::
  Fly   375 RPGIKALLNIIETVERNYPETMGRVLVVRAPRVFPIAWTIVSAFIDEHTRSKFLFYGPDCAHMKD 439

  Fly   225 GTSVSCDQ--LPKELGG 239
            |.:...|:  :|..|||
  Fly   440 GLAQYLDEEIVPDFLGG 456

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
pinta	NP_001287466.1	SEC14	87..240	CDD:238099	39/187 (21%)
retm	NP_001260132.1	PRELI	17..173	CDD:282550
		CRAL_TRIO_N	222..268	CDD:215024	9/52 (17%)
		CRAL_TRIO	293..456	CDD:279044	35/169 (21%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1471
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.810