DRSC/TRiP Functional Genomics Resources

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Protein Alignment pinta and ttpal

DIOPT Version :9

Sequence 1:NP_001287466.1 Gene:pinta / 42635 FlyBaseID:FBgn0038966 Length:273 Species:Drosophila melanogaster
Sequence 2:XP_021325407.1 Gene:ttpal / 321577 ZFINID:ZDB-GENE-030131-296 Length:360 Species:Danio rerio


Alignment Length:260 Identity:70/260 - (26%)
Similarity:115/260 - (44%) Gaps:24/260 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 PERVLAQVQDLSDWLVA-NPQINGCNTFENLHFFLRTSKFDVERAKKKLKTFYQMRAERTEWFDN 82
            ||..|..||.|.|.::. :|.:........|..|||..|||.:||.:.|..::..|....|.|.:
Zfish    69 PEWRLRDVQALRDMILKDHPNLRTRLDDAFLLRFLRARKFDYDRALQLLLNYHASRRAWPEVFQD 133

  Fly    83 RDPQLPEIQDLLKLGVFLPI--GPDAEQRMVVVIRTAAHDPKLHSQNNVFKTSKMILDLLLKLDP 145
            ..|.  .::.:|.|| ||.:  .||.:.|.::.:|.....|..:...:..:...:.|:.|::.: 
Zfish   134 LKPS--TVKHVLDLG-FLTVLPRPDPQGRYILCLRPGKWKPNDYPFVDNIRAIYLTLEKLIQPE- 194

  Fly   146 ETCARGMVAILDMQGVQLGHALQMNPKLIKRSVE-SWTAYPCQPKLLEFTNAPRHVNFFLNTFRI 209
            ||...|:|.::|..||.|..|....|.|.|:.|. ....:|.:.|.:...|.||   .|...|.|
Zfish   195 ETQVNGVVILVDYAGVGLSQASNPGPLLAKKVVGILQDGFPIRIKAVNIINEPR---IFKGIFAI 256

  Fly   210 ---FMTPKIRSRLFVRREGTSVSC-------DQLPKELGGQGLSYMELSVKWKQLVEENADFYVE 264
               |:..|:..|..:  .|:.::.       ..||:|.||.. ..:::|...:.|:|...:|.||
Zfish   257 IKPFLKEKMAERYVL--HGSDLASLHRVIPQSVLPQEYGGVS-GRLDMSAWSRTLLEAEEEFVVE 318

  Fly   265  264
            Zfish   319  318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pintaNP_001287466.1 SEC14 87..240 CDD:238099 41/165 (25%)
ttpalXP_021325407.1 CRAL_TRIO_N 74..120 CDD:215024 15/45 (33%)
SEC14 142..294 CDD:238099 40/158 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10174
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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