DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pinta and Sec14l5

DIOPT Version :9

Sequence 1:NP_001287466.1 Gene:pinta / 42635 FlyBaseID:FBgn0038966 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001129182.2 Gene:Sec14l5 / 287060 RGDID:1564638 Length:696 Species:Rattus norvegicus


Alignment Length:295 Identity:60/295 - (20%)
Similarity:102/295 - (34%) Gaps:95/295 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 QVATTDGDP------ERVLAQVQDLSD--------WLVAN-----PQINGCNTFENLHFFLRTSK 56
            ::||.|||.      ||.|..:..:.:        ||...     |:      .|::..|||...
  Rat   217 EMATADGDKLDADYIERCLGHLSPMQESCLVQLRRWLQETHKGKIPK------DEHILRFLRARD 275

  Fly    57 FDVERAKKKLKTFYQMRAERTEWFDNRDPQLPEIQDLLKLGVFLPIGP------------DAEQR 109
            |.:::|:       .|..:...|  .:..|:    ||| |..:.|..|            |.:.|
  Rat   276 FHLDKAR-------DMLCQSLSW--RKQHQV----DLL-LQTWRPPAPLQEFYAGGWHYQDIDGR 326

  Fly   110 MVVVIRTAAHDPKLHSQNNVFKT--SKMILDLLLKLDPE-------------------TCARGMV 153
            .:.::|....|.|     .:.|.  .:.:|..:|.::.|                   ||     
  Rat   327 PLYILRLGQMDTK-----GLMKAVGEEALLQHVLSVNEEGQKRCEGNTRQFGRPISSWTC----- 381

  Fly   154 AILDMQGVQLGHALQMNPKLIKRSVE-SWTAYPCQPKLLEFTNAPRHVNFFLNTFRIFMTPKIRS 217
             :||::|:.:.|..:...|.:.|.:| ....||.....|....|||...........|:....| 
  Rat   382 -LLDLEGLNMRHLWRPGVKALLRMIEVVEDNYPETLGRLLIVRAPRVFPVLWTLVSPFINENTR- 444

  Fly   218 RLFVRREGTS----------VSCDQLPKELGGQGL 242
            |.|:...|::          :..|.:|..|||:.:
  Rat   445 RKFLIYSGSNYQGPGGLVDYLDKDVIPDFLGGESV 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pintaNP_001287466.1 SEC14 87..240 CDD:238099 39/196 (20%)
Sec14l5NP_001129182.2 PRELI 17..173 CDD:309720
Amidase <179..309 CDD:327489 25/111 (23%)
CRAL_TRIO_N 243..288 CDD:215024 10/57 (18%)
CRAL_TRIO 314..477 CDD:306996 33/174 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.