DRSC/TRiP Functional Genomics Resources

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Protein Alignment pinta and CG30339

DIOPT Version :9

Sequence 1:NP_001287466.1 Gene:pinta / 42635 FlyBaseID:FBgn0038966 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_724813.1 Gene:CG30339 / 246549 FlyBaseID:FBgn0050339 Length:308 Species:Drosophila melanogaster


Alignment Length:276 Identity:70/276 - (25%)
Similarity:125/276 - (45%) Gaps:18/276 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SSSKRQVATTDGD--PERVLAQVQDLSDWLVANPQINGCNTFENLHFFLRTSKFDVERAKKKLKT 68
            |:..|::|.|:.:  .|||.|.::.|.|||...|.:......:.|..|||..||.:|:.|.||..
  Fly     8 SAELRRIAETELNEVEERVPADLKALRDWLAKQPHLRARQDDQFLVGFLRGCKFSLEKTKSKLDH 72

  Fly    69 FYQMRAERTEWFDNRDPQLPEIQDLL--KLGVFL----PIGPDAEQRMVVVIRTAAHDPKLHSQN 127
            ||.::....|.|..|   |.:.::|:  :.|.::    |.|.|..:  :.:......|||.....
  Fly    73 FYTIKTLMPELFGKR---LVDERNLILCRSGTYVRLPKPWGTDGPR--LQLTNYEKFDPKEFKLL 132

  Fly   128 NVFKTSKMILDLLLKLDPETCARGMVAILDMQGVQLGHALQMNPKLIKR-SVESWTAYPCQPKLL 191
            ::|:...||.:..::.|..:...|.|.|:||..:.|....|::..|||| .:.:..|.|.:.|.:
  Fly   133 DLFRYQTMITEQSIREDDHSNISGYVEIVDMAKMSLSFLAQLDFTLIKRMGIFAEKAQPTRLKGV 197

  Fly   192 EFTNAPRHVNFFLNTFRIFMTPKIRSRLFVRRE----GTSVSCDQLPKELGGQGLSYMELSVKWK 252
            ...|.|:.....||..:..|..|::.|..|.:.    ...:..:.||:|.||......::..:.:
  Fly   198 HLINCPKEGVALLNLAKSLMPSKLQQRFHVYKNLEQLNEVIPREYLPEEYGGNNGRIADIQAEAE 262

  Fly   253 QLVEENADFYVEQDKY 268
            :.:.....::.|..:|
  Fly   263 KKLLSYESYFAEDSQY 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pintaNP_001287466.1 SEC14 87..240 CDD:238099 39/163 (24%)
CG30339NP_724813.1 CRAL_TRIO_N 28..70 CDD:215024 14/41 (34%)
CRAL_TRIO 109..250 CDD:279044 35/142 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10174
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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