DRSC/TRiP Functional Genomics Resources

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Protein Alignment pinta and Rlbp1

DIOPT Version :9

Sequence 1:NP_001287466.1 Gene:pinta / 42635 FlyBaseID:FBgn0038966 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001166954.1 Gene:Rlbp1 / 19771 MGIID:97930 Length:317 Species:Mus musculus


Alignment Length:201 Identity:47/201 - (23%)
Similarity:89/201 - (44%) Gaps:20/201 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 FLRTSKFDVERAKKKLKTFYQMRAERTEWFDNRDPQLPEIQDLLKLGVFLPIGP------DAEQR 109
            |:|..||||.||.:.||.:...|.:..|.||:.  .:..::..::.|.     |      |...|
Mouse    99 FIRARKFDVGRAYELLKGYVNFRLQYPELFDSL--SMEALRCTIEAGY-----PGVLSSRDKYGR 156

  Fly   110 MVVVIRTAAHDPKLHSQNNVFKTSKMILDLLLKLDPETCARGMVAILDMQGVQLGHALQMNPKLI 174
            :|::........:..:.:.:.:....||:.||: :.||...|...:.:.:|..:..|..:.|..:
Mouse   157 VVMLFNIENWHCEEVTFDEILQAYCFILEKLLE-NEETQINGFCIVENFKGFTMQQAAGLRPSDL 220

  Fly   175 KRSVES-WTAYPCQPKLLEFTNAPRHVNFFLNTFRIFMTPKIRSRLFVR---REGTSVSCDQ--L 233
            |:.|:. ..::|.:.|.:.|.:.|.:.....|..:.|:..|:..|:||.   .:|.....|:  |
Mouse   221 KKMVDMLQDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKNKLLQRVFVHGDDLDGFFQEIDENIL 285

  Fly   234 PKELGG 239
            |.:.||
Mouse   286 PADFGG 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pintaNP_001287466.1 SEC14 87..240 CDD:238099 33/165 (20%)
Rlbp1NP_001166954.1 CRAL_TRIO_N 60..117 CDD:215024 10/17 (59%)
CRAL_TRIO 143..292 CDD:395525 33/155 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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