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Protein Alignment pinta and cgr-1
DIOPT Version :9
Sequence 1: | NP_001287466.1 |
Gene: | pinta / 42635 |
FlyBaseID: | FBgn0038966 |
Length: | 273 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_508618.2 |
Gene: | cgr-1 / 180650 |
WormBaseID: | WBGene00020847 |
Length: | 383 |
Species: | Caenorhabditis elegans |
Alignment Length: | 109 |
Identity: | 22/109 - (20%) |
Similarity: | 46/109 - (42%) |
Gaps: | 25/109 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 72 MRAERTEWFD--NRDPQLPEIQDLLKLGVFLPIGPDAEQRM--VVVIRTAAHDPKLHSQNNV--- 129
|..::|...| ||| |:::..:..:.|.|...:.:. ||.::..| |.|.:..|
Worm 74 MNNKQTTSVDQINRD-----IKNMSAVAEYFPGGIMGKSKRGDVVYMQAMA---KAHPKTLVKAG 130
Fly 130 ---------FKTSKMILDLLLKLDPETCAR-GMVAILDMQGVQL 163
...::|...::.:.:.||..: |::.|:|:.|..:
Worm 131 PTSQLFQLCISETEMSFKIIRQTEQETERKMGVIIIMDLDGFSM 174
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
pinta | NP_001287466.1 |
SEC14 |
87..240 |
CDD:238099 |
16/92 (17%) |
cgr-1 | NP_508618.2 |
SEC14 |
91..257 |
CDD:214706 |
15/87 (17%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG1471 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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