DRSC/TRiP Functional Genomics Resources

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Protein Alignment mats and mob2

DIOPT Version :10

Sequence 1:NP_651041.3 Gene:mats / 42634 FlyBaseID:FBgn0038965 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_587851.1 Gene:mob2 / 2539016 PomBaseID:SPCC970.04C Length:244 Species:Schizosaccharomyces pombe


Alignment Length:206 Identity:82/206 - (39%)
Similarity:125/206 - (60%) Gaps:4/206 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FGSRSSKTFKPKKNIP--EGTHQYDLMKHAAATLGSGNLRNAVALPDGEDLNEWVAVNTVDFFNQ 67
            |..:||.:...:...|  |.|..|.........|..||....|:||...||:||||:|..:.|..
pombe    32 FSKKSSTSQLVRTGSPSVEPTALYLQQPFVRTHLVKGNFSTIVSLPRFVDLDEWVALNVYELFTY 96

  Fly    68 INMLYGTITEFCTEETCGIMSAGPKYEYHWADGLTVKKPIKCSAPKYIDYLMTWVQDQLDDETLF 132
            :|..|.....|||.:||.:|||...::|.|.|  ..:||:...||:||:|::.|::::|.|:.:|
pombe    97 LNHFYDVFATFCTVKTCPVMSAAANFDYTWLD--NNRKPVHLPAPQYIEYVLAWIENRLHDQNVF 159

  Fly   133 PSKIGVPFPKNFHSSAKTILKRLFRVYAHIYHQHFTEVVTLGEEAHLNTSFKHFIFFVQEFNLIE 197
            |:|.|:|||.||....|.|.|::||::||:|:.|:.|::.|..|||.|:.|.|||.|.:||.|::
pombe   160 PTKAGLPFPSNFLVIVKAIYKQMFRIFAHMYYAHYAEILHLSLEAHWNSFFAHFIAFGKEFQLLD 224

  Fly   198 RRELAPLQELI 208
            :|:.|||::||
pombe   225 KRDTAPLKDLI 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
matsNP_651041.3 Mob1_phocein 34..204 CDD:461000 71/169 (42%)
mob2NP_587851.1 Mob1_phocein 65..231 CDD:461000 71/167 (43%)

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