DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nop56 and AT5G27140

DIOPT Version :10

Sequence 1:NP_651040.3 Gene:Nop56 / 42633 FlyBaseID:FBgn0038964 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_001330282.1 Gene:AT5G27140 / 832772 AraportID:AT5G27140 Length:450 Species:Arabidopsis thaliana


Alignment Length:491 Identity:176/491 - (35%)
Similarity:255/491 - (51%) Gaps:73/491 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LYVLYEHAAGFSLFSVKEFEEVSMFLPQVESSVTDL-AKFNSIVKLAGFAPFKTAIAALENINAI 67
            :.||:|.:.||:||.|.:..::        |:|.|| .:|.|                       
plant     1 MLVLFETSGGFALFKVLDEGKL--------SNVEDLGTEFYS----------------------- 34

  Fly    68 SEGIVPQDLLSFLDDFFAKLKKKKC----TLGIADAKLGAAITEAIGVQCSHFGVVPEILRGVRF 128
            :|......|..||        |..|    .|.:||.|||..|||.:.::|.|...|.|:|||||.
plant    35 AESARRMGLHKFL--------KNNCDDGEILAVADPKLGDIITEKLDIECVHNDAVMELLRGVRS 91

  Fly   129 HFAKLVKGFTDKSAGVAQLGLGHSYSRAKVKFNVHRSDNMIIQSIALLDQLDKDVNTFSMRIREW 193
            ...:|:.|..|.......|.|.|..:|.|:|....:.:.|||.||:|||.|||::||::..:.|.
plant    92 QLTELLSGLDDNDLAPVSLELSHILARYKLKITSDKVETMIILSISLLDDLDKELNTYTTSVCEL 156

  Fly   194 YSYHFPELVKIVPDNYMFAKAAKFIKDRKNLTQDQLEDLEKIVMDSAKAQAIIDAAKMSMGMDIS 258
            |..|||||..||.||.::||..|.:.:|.|..   ..|..:|:.|..:|: :.:|:.:|...::|
plant   157 YGLHFPELANIVQDNILYAKVVKLMGNRINAA---TLDFSEILADEVEAE-LKEASMVSTRTEVS 217

  Fly   259 IVDLMNIELFAERVVKLSEYRKKLSTYLHNKMNLVAPNLQSLIGDQVGARLISHAGSLTNLAKYP 323
            .:|||:|:...::|:.::|.:..|...|.||||.:||||.:|:|:.||||||||.|||.||:|.|
plant   218 DLDLMHIQELCDQVLSIAEDKTLLCDDLKNKMNKIAPNLTALVGELVGARLISHCGSLWNLSKLP 282

  Fly   324 ASTVQILGAEKALFRALKTRSNTPKYGLIYHSSFIGRAGLKNKGRISRFLANKCSIASRIDCFLE 388
            .||:|||||||.|::||||:..|||||||||:..:.:|..:|||:|:|.||.|.::|.|.|.|..
plant   283 WSTIQILGAEKTLYKALKTKQATPKYGLIYHAPLVRQAAPENKGKIARSLAAKSALAIRCDAFGN 347

  Fly   389 QPTSVFGETLKQQVEDRLKFYESGDVPRKNIEVMKEAIEAAGQEAAITVQSEKKKKKKKRAAEDE 453
            ...:..|...:.::|.||:..|.||:                  .|...:.|...|..|:.|:||
plant   348 GQDNTMGVESRLKLEARLRNLEGGDL------------------GACEEEEEVNDKDTKKEADDE 394

  Fly   454 GE--TNGASNGNGAAAEAENGNGNDDGEPKKKKKKK 487
            .|  |...|......||.|...     :|.||.|::
plant   395 EEPKTEECSKKRKKEAELETVE-----DPAKKSKQE 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nop56NP_651040.3 NOP5NT 5..70 CDD:462382 14/65 (22%)
Nop 176..407 CDD:460335 102/230 (44%)
AT5G27140NP_001330282.1 NOP5NT 2..>48 CDD:462382 18/84 (21%)
Nop 139..366 CDD:460335 102/230 (44%)

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