DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nop56 and AT5G27120

DIOPT Version :10

Sequence 1:NP_651040.3 Gene:Nop56 / 42633 FlyBaseID:FBgn0038964 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_198064.1 Gene:AT5G27120 / 832770 AraportID:AT5G27120 Length:533 Species:Arabidopsis thaliana


Alignment Length:533 Identity:222/533 - (41%)
Similarity:306/533 - (57%) Gaps:67/533 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LYVLYEHAAGFSLFSVKEFEEVSMFLPQVES-----SVTDLAKFNSIVKLAGFAPFKTAIAALEN 63
            :.:|:|...||::|.|....::|    .||.     |...||:  .:|||..|..|.....|||.
plant     1 MLILFETPGGFAIFKVLNEGKLS----NVEDLGNEFSTAKLAR--KMVKLVAFDKFDNTAEALEA 59

  Fly    64 INAISEGIVPQDLLSFLDDFFAKLKKKKC---TLGIADAKLGAAITEAIGVQCSHFGVVPEILRG 125
            :..:.||...:.|..||        |..|   ||.:||:|||..|.|.:.:.|.|...|.|:|||
plant    60 VAKLLEGTPSKGLRKFL--------KANCVGETLAVADSKLGNIIKEKLKIVCVHNNAVMELLRG 116

  Fly   126 VRFHFAKLVKGFTDKSAGVAQLGLGHSYSRAKVKFNVHRSDNMIIQSIALLDQLDKDVNTFSMRI 190
            :|....:|:.|..|:..|...|||.||.:|.|:||:..:.|.||||:|.|||.|||::||::||:
plant   117 IRSQLTELISGLGDQDLGPMSLGLSHSLARYKLKFSSDKVDTMIIQAIGLLDDLDKELNTYAMRV 181

  Fly   191 REWYSYHFPELVKIVPDNYMFAKAAKFIKDRKNLTQDQLEDLEKIVMDSAKAQAIIDAAKMSMGM 255
            |||:.:|||||.|||.||.::|||.|.:.:|.|..:   .|..:|:.|..:|: :.:||.:|||.
plant   182 REWFGWHFPELAKIVQDNILYAKAVKLMGNRINAAK---LDFSEILADEIEAE-LKEAAVISMGT 242

  Fly   256 DISIVDLMNIELFAERVVKLSEYRKKLSTYLHNKMNLVAPNLQSLIGDQVGARLISHAGSLTNLA 320
            ::|.:||::|....::|:.|:|||.:|..||.::||.:||||.:|:|:.||||||||.|||.|||
plant   243 EVSDLDLLHIRELCDQVLSLAEYRAQLYDYLKSRMNTIAPNLTALVGELVGARLISHGGSLLNLA 307

  Fly   321 KYPASTVQILGAEKALFRALKTRSNTPKYGLIYHSSFIGRAGLKNKGRISRFLANKCSIASRIDC 385
            |.|.||||||||||||||||||:..|||||||:|:|.:|:|..||||:|||.||.|..:|.|.|.
plant   308 KQPGSTVQILGAEKALFRALKTKHATPKYGLIFHASVVGQAAPKNKGKISRSLAAKSVLAIRCDA 372

  Fly   386 FLEQPTSVFGETLKQQVEDRLKFYESGDVPR--------KNIEVM-KEAIEAAG---------QE 432
            ..:...:..|...:.::|.||:..|..|:.|        ..|||. |:..:.:|         ..
plant   373 LGDSQDNTMGVENRLKLEARLRTLEGKDLGRLSGSAKGKPKIEVYDKDKKKGSGGLITPAKTYNT 437

  Fly   433 AA------ITVQS-----EKKKKKKKRAAEDEGE------TNGASNGNGAAAEAENGNGNDDGEP 480
            ||      .||.|     |||.||||:.|:||.|      :...||.....||.|...     ||
plant   438 AADSLLQTPTVDSENGVKEKKDKKKKKKADDEEEAKTEEPSKKKSNKKKTEAEPETAE-----EP 497

  Fly   481 -KKKKKKKNKNKE 492
             ||:||||.|::|
plant   498 AKKEKKKKRKHEE 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nop56NP_651040.3 NOP5NT 5..70 CDD:462382 20/69 (29%)
Nop 176..407 CDD:460335 118/230 (51%)
AT5G27120NP_198064.1 NOP5NT 2..66 CDD:462382 20/69 (29%)
Nop 167..394 CDD:460335 118/230 (51%)

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