DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nop56 and AT3G12860

DIOPT Version :10

Sequence 1:NP_651040.3 Gene:Nop56 / 42633 FlyBaseID:FBgn0038964 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_187892.2 Gene:AT3G12860 / 820468 AraportID:AT3G12860 Length:499 Species:Arabidopsis thaliana


Alignment Length:497 Identity:267/497 - (53%)
Similarity:352/497 - (70%) Gaps:8/497 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LYVLYEHAAGFSLFSVKEFEEVSMFLPQVESSVTDLAKFNSIVKLAGFAPFKTAIAALENINAIS 68
            :|:|.|..:|:.||.....:|:......|.|||:||::|..:|:|..|.||::|:.||..|||:|
plant     3 IYLLSESPSGYGLFEGHGSDEIGQNTEAVRSSVSDLSRFGRVVQLTAFHPFQSALDALNQINAVS 67

  Fly    69 EGIVPQDLLSFLDDFFAKL---KKKKCTLGIADAKLGAAITEAIGVQCSHFGVVPEILRGVRFHF 130
            ||.:..:|.|||:....|:   ||.|.:||:::.|:|:.|.||..:.|.....|.|:|||||.||
plant    68 EGYMSDELRSFLELNLPKVKEGKKPKFSLGVSEPKIGSCIFEATKIPCQSNEFVHELLRGVRQHF 132

  Fly   131 AKLVKGFTDKSAGVAQLGLGHSYSRAKVKFNVHRSDNMIIQSIALLDQLDKDVNTFSMRIREWYS 195
            .:.:|.........|||||.||||||||||||:|.|||:||:|.:||.||||:|:|:||:|||||
plant   133 DRFIKDLKPGDLEKAQLGLAHSYSRAKVKFNVNRVDNMVIQAIFMLDTLDKDINSFAMRVREWYS 197

  Fly   196 YHFPELVKIVPDNYMFAKAAKFIKDRKNLTQDQLEDLEKIVMDSAKAQAIIDAAKMSMGMDISIV 260
            :|||||||||.|||::||.:|.|.|:..|:::.:..|.:.:.|..||:.:|:|.|.|||.|:|.|
plant   198 WHFPELVKIVNDNYLYAKVSKIIVDKSKLSEEHIPMLTEALGDEDKAREVIEAGKASMGQDLSPV 262

  Fly   261 DLMNIELFAERVVKLSEYRKKLSTYLHNKMNLVAPNLQSLIGDQVGARLISHAGSLTNLAKYPAS 325
            ||:|::.||:||:.|::|||||..||..||:.:||||.:|||:.|||||||||||||||||.|:|
plant   263 DLINVQTFAQRVMDLADYRKKLYDYLVTKMSDIAPNLAALIGEMVGARLISHAGSLTNLAKCPSS 327

  Fly   326 TVQILGAEKALFRALKTRSNTPKYGLIYHSSFIGRAGLKNKGRISRFLANKCSIASRIDCFLEQP 390
            |:||||||||||||||||.||||||||:||||||||..||||||:||||||||||||||||.:..
plant   328 TLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASAKNKGRIARFLANKCSIASRIDCFSDNS 392

  Fly   391 TSVFGETLKQQVEDRLKFYESGDVPRKNIEVMKEAIE--AAGQEAAITVQSEKKKKKKK---RAA 450
            |:.|||.|::|||:||.||:.|..||||::||||.:|  ....|...||.:.:||||:|   :..
plant   393 TTAFGEKLREQVEERLDFYDKGVAPRKNVDVMKEVLENLEKKDEGEKTVDASEKKKKRKTEEKEE 457

  Fly   451 EDEGETNGASNGNGAAAEAENGNGNDDGEPKKKKKKKNKNKE 492
            |.|.|.:........|.|.|.....|:|..|||||.|:::.|
plant   458 EKEEEKSKKKKKKSKAVEGEELTATDNGHSKKKKKTKSQDDE 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nop56NP_651040.3 NOP5NT 5..70 CDD:462382 26/64 (41%)
Nop 176..407 CDD:460335 153/230 (67%)
AT3G12860NP_187892.2 NOP5NT 4..69 CDD:462382 26/64 (41%)
Nop 178..409 CDD:460335 153/230 (67%)

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