DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nop56 and nop56

DIOPT Version :10

Sequence 1:NP_651040.3 Gene:Nop56 / 42633 FlyBaseID:FBgn0038964 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_001184132.1 Gene:nop56 / 733535 XenbaseID:XB-GENE-5879910 Length:536 Species:Xenopus tropicalis


Alignment Length:498 Identity:311/498 - (62%)
Similarity:392/498 - (78%) Gaps:8/498 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LYVLYEHAAGFSLFSVKEFEEVSMFLPQVESSVTDLAKFNSIVKLAGFAPFKTAIAALENINAIS 68
            |:||:|||||::||.|||.||:.:.:||||.|:.::.|||:|||||.|:|||:|.:||||:||||
 Frog     4 LHVLFEHAAGYALFVVKEVEEIGLLIPQVEESLLNVGKFNNIVKLAAFSPFKSAQSALENVNAIS 68

  Fly    69 EGIVPQDLLSFLDDFFAKLKKKKCTLGIADAKLGAAITEAIGVQCSHFGVVPEILRGVRFHFAKL 133
            ||::.:||...|:... ..||||..||:.|||:||||.|.:.:.|...|.|.|||||:|.||..|
 Frog    69 EGVLHEDLKLLLETNM-PAKKKKALLGVGDAKIGAAIQEELKIPCQTGGAVAEILRGIRLHFHSL 132

  Fly   134 VKGFTDKSAGVAQLGLGHSYSRAKVKFNVHRSDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHF 198
            |||.|.:||..||||||||||||||||||:|.||||||||:||||||||:||||||:||||.|||
 Frog   133 VKGLTAQSASKAQLGLGHSYSRAKVKFNVNRVDNMIIQSISLLDQLDKDINTFSMRVREWYGYHF 197

  Fly   199 PELVKIVPDNYMFAKAAKFIKDRKNLTQDQLEDLEKIVMDSAKAQAIIDAAKMSMGMDISIVDLM 263
            |||:|||.|||.:.:.||:|.:||.|::::||::|:|:||||||||::||::.|||||||.:||:
 Frog   198 PELIKIVSDNYTYCRMAKYIGNRKELSEEKLEEMEEILMDSAKAQAVLDASRSSMGMDISPIDLI 262

  Fly   264 NIELFAERVVKLSEYRKKLSTYLHNKMNLVAPNLQSLIGDQVGARLISHAGSLTNLAKYPASTVQ 328
            |||.|:.||:.||||||:|..||.:||:.|||:|.:|||:.||||||||||||||||||||||||
 Frog   263 NIESFSSRVISLSEYRKELQEYLRSKMSQVAPSLSALIGEVVGARLISHAGSLTNLAKYPASTVQ 327

  Fly   329 ILGAEKALFRALKTRSNTPKYGLIYHSSFIGRAGLKNKGRISRFLANKCSIASRIDCFLEQPTSV 393
            |||||||||||||||.||||||||:||:|||||..||||||||:|||||:||||||||.|.||||
 Frog   328 ILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKCTIASRIDCFSEIPTSV 392

  Fly   394 FGETLKQQVEDRLKFYESGDVPRKNIEVMKEAIEAAGQEAAITVQSEKKKKKKKRAAEDEGETNG 458
            ||:.|::|||:||.|||:|:.||||::|||||.:.| .|....::.:..||:|||...::.:...
 Frog   393 FGDKLREQVEERLAFYETGEAPRKNLDVMKEAQQEA-TEVVTEIKRKLDKKEKKRKKREKRQLEA 456

  Fly   459 ASNGNGAAAEAE------NGNGNDDGEPKKKKKKKNKNKEAVE 495
            .:....|..|.|      ..||.::.||||||||::...|..|
 Frog   457 LAVAQEAEEEEEPTQKKSRENGEEEEEPKKKKKKRHAEPEVSE 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nop56NP_651040.3 NOP5NT 5..70 CDD:462382 40/64 (63%)
Nop 176..407 CDD:460335 169/230 (73%)
nop56NP_001184132.1 NOP5NT 5..70 CDD:462382 40/64 (63%)
Nop 175..405 CDD:460335 168/229 (73%)

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