DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nop56 and nop58

DIOPT Version :10

Sequence 1:NP_651040.3 Gene:Nop56 / 42633 FlyBaseID:FBgn0038964 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_001009889.2 Gene:nop58 / 494152 ZFINID:ZDB-GENE-040426-2140 Length:553 Species:Danio rerio


Alignment Length:563 Identity:221/563 - (39%)
Similarity:307/563 - (54%) Gaps:84/563 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LYVLYEHAAGFSLFSVKEFEEVSMFLPQVESSVTDL---AKFNSIVKLAGFAPFKTAIAALENIN 65
            :.||:|.|||:::|.|.:.::    |.||:|...:.   .|.|.:|||..|..|:....||....
Zfish     1 MLVLFETAAGYAIFKVLDEQK----LQQVDSLWKEFETPEKANKVVKLKHFEKFQDTTEALAAAT 61

  Fly    66 AISEGIVPQDLLSFLDDFFAKLKKKKCTLGIADAKLGAAITEAIGVQCSHFGVVPEILRGVRFHF 130
            |:.||.:.:.|...|....||...::  |.|.|||||..|.|.:.:.|.|...|.|::||:|...
Zfish    62 AMVEGKLGKSLKKVLKKVVAKEAHEQ--LAITDAKLGGVIKEKLNLSCVHSPAVAELMRGIRNQM 124

  Fly   131 AKLVKGFTDKSAGVAQLGLGHSYSRAKVKFNVHRSDNMIIQSIALLDQLDKDVNTFSMRIREWYS 195
            ..|:.|...:......|||.||.||.|:||:..:.|.||:|:|:|||.|||::|.:.||.||||.
Zfish   125 EGLITGLPAREIAAMSLGLAHSLSRYKLKFSPDKVDTMIVQAISLLDDLDKELNNYIMRCREWYG 189

  Fly   196 YHFPELVKIVPDNYMFAKAAKFIKDRKNLTQDQLEDLEKIVMDSAKAQAIIDAAKMSMGMDISIV 260
            :||||:.||:.||..:.|..:.|.||.|:...:|.:   .:.:..:|:..: ||::|||.::|..
Zfish   190 WHFPEIGKIITDNLAYCKTVRKIGDRTNVATTELSE---FLPEEIEAEVKL-AAEISMGTEVSEE 250

  Fly   261 DLMNIELFAERVVKLSEYRKKLSTYLHNKMNLVAPNLQSLIGDQVGARLISHAGSLTNLAKYPAS 325
            |:.||....::|:::||||.:|..||.|:|..:||||..::|:.||||||||||||.||||:|||
Zfish   251 DIANIMHLCDQVIEISEYRTQLYDYLKNRMMAIAPNLTVMVGELVGARLISHAGSLLNLAKHPAS 315

  Fly   326 TVQILGAEKALFRALKTRSNTPKYGLIYHSSFIGRAGLKNKGRISRFLANKCSIASRIDCFLEQP 390
            ||||||||||||||||||.:|||||||||:|.:|:...||||:|||.||.|.::|.|.|...|..
Zfish   316 TVQILGAEKALFRALKTRRDTPKYGLIYHASLVGQTTAKNKGKISRMLAAKTALAIRYDALGEDT 380

  Fly   391 TSVFGETLKQQVEDRLKFYE-------------------------------SGD--VP----RKN 418
            .:..|...:.::|.||:|.|                               |||  :|    ::.
Zfish   381 NAEMGVENRAKLEARLRFLEEKGIRRISGSGKALAKADKYQHKSDVKVYDPSGDSTLPTVSKKRK 445

  Fly   419 IEVMKEA------IEA--------AGQEAAITVQSEKKKKKKKRAAE----DEGET--------- 456
            ||.::||      |||        |..|.....::.|||||||||.|    :|.||         
Zfish   446 IEEVEEAEEEDQPIEAKAKKVKREAPAEGEAETETPKKKKKKKRAEEEPKQEEEETAVSLVEEVR 510

  Fly   457 -NGASNGNGAAAEAENGNGNDD------GEPKKKKKKKNKNKE 492
             ..:......|||.|.....::      .|.|||||||.|..|
Zfish   511 EEPSKKKKKRAAEVELKEEPEETVVEETTEKKKKKKKKVKEDE 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nop56NP_651040.3 NOP5NT 5..70 CDD:462382 22/67 (33%)
Nop 176..407 CDD:460335 116/230 (50%)
nop58NP_001009889.2 NOP5NT 2..>52 CDD:462382 19/53 (36%)
Nop 170..397 CDD:460335 116/230 (50%)

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