DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nop56 and nop58

DIOPT Version :10

Sequence 1:NP_651040.3 Gene:Nop56 / 42633 FlyBaseID:FBgn0038964 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_989298.1 Gene:nop58 / 394916 XenbaseID:XB-GENE-990556 Length:533 Species:Xenopus tropicalis


Alignment Length:544 Identity:214/544 - (39%)
Similarity:296/544 - (54%) Gaps:70/544 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LYVLYEHAAGFSLFSV---KEFEEVSMFLPQVESSVTDLAKFNSIVKLAGFAPFKTAIAALENIN 65
            :.||:|.|||:::|.|   .:.:||.....:.|:.    .|.|.:|||..|..|:....||....
 Frog     1 MLVLFETAAGYAIFKVLDESKLQEVDSIWKEFETP----EKANRVVKLKHFEKFQDTTEALAAST 61

  Fly    66 AISEGIVPQDLLSFLDDFFAKLKKKKCTLGIADAKLGAAITEAIGVQCSHFGVVPEILRGVRFHF 130
            |:.||.:.::|...|....||...::  |.|||||||..|.:...:.|.|..:|.|::||:|...
 Frog    62 ALVEGKLSKNLKKVLRKIAAKEAHEQ--LAIADAKLGGVIKDKANISCVHSSMVTELMRGIRNQI 124

  Fly   131 AKLVKGFTDKSAGVAQLGLGHSYSRAKVKFNVHRSDNMIIQSIALLDQLDKDVNTFSMRIREWYS 195
            ..|:.|.:.:......|||.||.||.|:||:..:.|.||:|:|:|||.|||::|.:.||.||||.
 Frog   125 DGLITGISSREMAAMSLGLAHSLSRYKLKFSPDKVDTMIVQAISLLDDLDKELNNYIMRCREWYG 189

  Fly   196 YHFPELVKIVPDNYMFAKAAKFIKDRKNL-TQDQLEDLEKIVMDSAKAQAIIDAAKMSMGMDISI 259
            :|||||.||:.||..:.|..:.:.||.|. |.|..|.|.:.|....||     ||::|||.::|.
 Frog   190 WHFPELGKIITDNLAYCKCLRAVGDRINFATFDLSEILPEEVETEVKA-----AAEISMGTEVSE 249

  Fly   260 VDLMNIELFAERVVKLSEYRKKLSTYLHNKMNLVAPNLQSLIGDQVGARLISHAGSLTNLAKYPA 324
            .|:.||....::|:::||||.:|..||.|:|..:||||..|:|:.||||||:|||||.||||:||
 Frog   250 EDINNILHLCDQVIEISEYRSQLYDYLKNRMMAIAPNLTVLVGELVGARLIAHAGSLLNLAKHPA 314

  Fly   325 STVQILGAEKALFRALKTRSNTPKYGLIYHSSFIGRAGLKNKGRISRFLANKCSIASRIDCFLEQ 389
            |||||||||||||||||||.:|||||||||:|.:|:...||||:|||.||.|.::|.|.|...|.
 Frog   315 STVQILGAEKALFRALKTRKDTPKYGLIYHASLVGQTTPKNKGKISRMLAAKAALAIRYDALGED 379

  Fly   390 PTSVFGETLKQQVEDRLKFYE-------------------------------SGD-----VPRK- 417
            ..:..|...:.::|.||:..|                               |||     ||:| 
 Frog   380 TNAELGVETRAKLESRLRHLEEKGLKRISGTGKALARAEKYQHKSEVRTYDPSGDSTLPSVPKKR 444

  Fly   418 --------------NIEVMKEAIEAAGQEAAITVQSEKKKKKKKRAAEDEGETNGASNGNGAAAE 468
                          .::..|..:|...:|..|..::.|||||||:...:|.|.....    ...|
 Frog   445 KFEEVEEEEQPAETKVKSKKPKVEVVQEEEEIEEEAPKKKKKKKKIKVEEEEAEAVE----VEVE 505

  Fly   469 AENGNGNDDGEPKKKKKKKNKNKE 492
            .|..:.:...|..||||||.|.|:
 Frog   506 EEEPSTSTAVETPKKKKKKKKVKQ 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nop56NP_651040.3 NOP5NT 5..70 CDD:462382 21/67 (31%)
Nop 176..407 CDD:460335 121/231 (52%)
nop58NP_989298.1 NOP5NT 2..66 CDD:462382 21/67 (31%)
Nop 170..397 CDD:460335 121/231 (52%)

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