DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nop56 and nop56

DIOPT Version :10

Sequence 1:NP_651040.3 Gene:Nop56 / 42633 FlyBaseID:FBgn0038964 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_957511.2 Gene:nop56 / 394196 ZFINID:ZDB-GENE-040109-1 Length:548 Species:Danio rerio


Alignment Length:520 Identity:325/520 - (62%)
Similarity:393/520 - (75%) Gaps:30/520 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LYVLYEHAAGFSLFSVKEFEEVSMFLPQVESSVTDLAKFNSIVKLAGFAPFKTAIAALENINAIS 68
            |:||:|||||::|.:|||.||:.|.|||||.||.::.||:|:|||:.|.|||:|..|||||||:|
Zfish     4 LHVLFEHAAGYALLAVKEVEEIGMLLPQVEESVLNVGKFSSVVKLSAFFPFKSAQGALENINAVS 68

  Fly    69 EGIVPQDLLSFLDDFFAKLKKKKCTLGIADAKLGAAITEAIGVQCSHFGVVPEILRGVRFHFAKL 133
            ||:|..||..||:.......|||..||::|||||||:.|.:.:.....|||.||:||||.||..|
Zfish    69 EGVVHADLKLFLETNLPSGGKKKPMLGVSDAKLGAALQEELNLSIQTGGVVAEIIRGVRLHFHSL 133

  Fly   134 VKGFTDKSAGVAQLGLGHSYSRAKVKFNVHRSDNMIIQSIALLDQLDKDVNTFSMRIREWYSYHF 198
            |||.|.::|..||||||||||||||||||:|:|||||||||||||||||:||||||:||||.|||
Zfish   134 VKGLTAQAASKAQLGLGHSYSRAKVKFNVNRADNMIIQSIALLDQLDKDINTFSMRVREWYGYHF 198

  Fly   199 PELVKIVPDNYMFAKAAKFIKDRKNLTQDQLEDLEKIVMDSAKAQAIIDAAKMSMGMDISIVDLM 263
            |||:|||.||..:.|.||.|.:||.|:::.||.:|:|.|||||||||:||::.|||||||.:||:
Zfish   199 PELIKIVSDNSTYCKLAKLIGNRKELSEEMLEAMEEITMDSAKAQAILDASRSSMGMDISPIDLI 263

  Fly   264 NIELFAERVVKLSEYRKKLSTYLHNKMNLVAPNLQSLIGDQVGARLISHAGSLTNLAKYPASTVQ 328
            |||.|:.|||.|::||::|..||.:||..|||||.:|||:.||||||||||||||||||||||||
Zfish   264 NIECFSSRVVSLTDYRQELQEYLRSKMGQVAPNLAALIGEVVGARLISHAGSLTNLAKYPASTVQ 328

  Fly   329 ILGAEKALFRALKTRSNTPKYGLIYHSSFIGRAGLKNKGRISRFLANKCSIASRIDCFLEQPTSV 393
            |||||||||||||||.||||||||:||:|||||..||||||||:|||||:||||||||.|.||||
Zfish   329 ILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKCTIASRIDCFSEVPTSV 393

  Fly   394 FGETLKQQVEDRLKFYESGDVPRKNIEVMKEAIEAAGQEAA-ITVQSEKKKKKKKR--------- 448
            ||:.|:.|||:||.|||:|:.||||::|||||:..|.:.|| |..:.|||:||||:         
Zfish   394 FGDKLRDQVEERLAFYETGEAPRKNLDVMKEAVAQASEVAAEIKRKLEKKEKKKKKRQKKLEALS 458

  Fly   449 AAEDEGETNGASNGN----------GAAAEAE-------NGNGNDDGEPKKKKKKKNKNKEAVEA 496
            .||.:.||||....|          .||.|.|       ..||.::...|||||:|   .|||||
Zfish   459 TAEGDEETNGDVEENEVATKKKKKKQAAEEMEVKEDEEVTTNGVEETPGKKKKKRK---IEAVEA 520

  Fly   497  496
            Zfish   521  520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nop56NP_651040.3 NOP5NT 5..70 CDD:462382 40/64 (63%)
Nop 176..407 CDD:460335 169/230 (73%)
nop56NP_957511.2 NOP5NT 5..70 CDD:462382 40/64 (63%)
Nop 176..406 CDD:460335 168/229 (73%)

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