DRSC/TRiP Functional Genomics Resources

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Protein Alignment lqfR and AT1G08670

DIOPT Version :10

Sequence 1:NP_732736.2 Gene:lqfR / 42632 FlyBaseID:FBgn0261279 Length:1415 Species:Drosophila melanogaster
Sequence 2:NP_172343.2 Gene:AT1G08670 / 837389 AraportID:AT1G08670 Length:231 Species:Arabidopsis thaliana


Alignment Length:43 Identity:16/43 - (37%)
Similarity:22/43 - (51%) Gaps:7/43 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 QEKLW-KGV---NFMNRFLPANDRMALLPAAPGELAEPGTIYV 142
            |.:|| |||   :|..||.....|:.|   :.||..:|..|:|
plant   275 QLRLWNKGVDSESFNPRFRSQEMRIRL---SNGEPEKPLVIHV 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lqfRNP_732736.2 ENTH_EpsinR 28..153 CDD:340786 16/43 (37%)
Telomere_reg-2 1072..1184 CDD:462990
AT1G08670NP_172343.2 ENTH 35..159 CDD:426255
Blue background indicates that the domain is not in the aligned region.

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