DRSC/TRiP Functional Genomics Resources

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Protein Alignment lqfR and AT3G59290

DIOPT Version :9

Sequence 1:NP_732736.2 Gene:lqfR / 42632 FlyBaseID:FBgn0261279 Length:1415 Species:Drosophila melanogaster
Sequence 2:NP_567079.1 Gene:AT3G59290 / 825098 AraportID:AT3G59290 Length:1024 Species:Arabidopsis thaliana


Alignment Length:597 Identity:157/597 - (26%)
Similarity:232/597 - (38%) Gaps:145/597 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VRELADKVTNVVMNYTETEGKVREATNDDPWGPTGPLMQELAYSTFSYETFPEVMSMLWKRMLQD 75
            ||:|...|...|:.....|.||.:||:::.|||.|.|:.::|:::.:|..:...|.:|||| |.|
plant     9 VRDLKRGVNKKVLKVPGIEQKVLDATSNESWGPHGSLLADIAHASRNYHEYQITMGVLWKR-LSD 72

  Fly    76 NKTNWRRTYKSLLLLNYLVRNGSERVVTSSREHIYDLRSLENYTFTDEGGKDQGINVRHKVRELI 140
            :..|||..||:|.:|.|:|.:|||||:...:||.|.:.:|..:.:.|..|||||.|||.|.:.|:
plant    73 SGKNWRHVYKALTVLEYMVGHGSERVIEEVKEHAYQITTLSGFQYIDSSGKDQGSNVRKKAQSLV 137

  Fly   141 DFIQDDDRLREERKKAKKNKDKYIGMSSDAMGMRSGGYS---GYSGGSGGGGGGSG--------G 194
            ..:.|.:|:.|.|:||..|:|||    .::|...||||.   .|.|..|....|..        |
plant   138 ALVNDKERITEVREKAAANRDKY----HNSMHRPSGGYGDKYDYEGRYGDRDEGRSSYGKEREYG 198

  Fly   195 YNDGDYRSSRGDNWYSDKSADKDRY-----EDDD--------THYDGEREGSDSDSPSPRRN--- 243
            |.|.|..|..||.:..|   .:|||     .||:        .:|:|.| |..||...|..:   
plant   199 YRDDDRNSRDGDRYSRD---SEDRYGRDGNTDDEYRGRSRSVDNYNGSR-GRSSDRERPIEDDGQ 259

  Fly   244 YRYNDRASPAEVASEAKPSSLNMNIRSKTV-SSPVSKQPTSTASAKPALSQKKIDLGAAANFGKP 307
            ....|..:||:..|:.....|......:.: ::|.|.:...:.|..|..|::  |.|...   :.
plant   260 SSSRDSGAPADDHSQDGRGGLERKFSEQNIGAAPPSYEEAVSESRSPVYSER--DGGETP---QV 319

  Fly   308 APGGAAGIHSP--------------THRDTPTSVDLMGGASPSPSTSKANNNTQSNNNDLLDDLF 358
            ||.|||.  ||              .:..:|..|:......|..|.|.|                
plant   320 APPGAAA--SPLAENISVDNKAADFVNESSPQQVEAFDEFDPRGSVSAA---------------- 366

  Fly   359 KTCSPPPGQEKTLNSAAVIVDDDDDFNPRASDASQQEFGDFASAFGQPSAGSTISEPPS------ 417
              |:|..|..........:|.....  |.:.:|.....|..:..|.........|:..|      
plant   367 --CAPTAGASVPAPIPPTVVSTPAP--PASINAEMDLLGSLSDVFSPNPLAIVTSDSTSVETNGQ 427

  Fly   418 --TGLVPAANDEFADFAAFQGSTTSTSALDGNLLKTATPANDS-FDLFNSAPTSTA--------- 470
              |||.|          :|..|.:||...|       .|..|| |....||.|.|:         
plant   428 ANTGLAP----------SFSTSQSSTQPFD-------DPFGDSPFKAITSADTETSQHQSFGVPF 475

  Fly   471 -------------------AATTATDLLAGLGDLSIHQSMPMAVEEQLASSNDSMS--------- 507
                               |.:..||...|:.::....::.:..:||..:|...:.         
plant   476 QPTPPTSNPNNEHNFGFGEAFSAVTDSEPGVQNMQAPPNLSVFPQEQFDTSQSEIDILAGILPPS 540

  Fly   508 ----SASPQPPS 515
                |.||||.|
plant   541 GPPVSLSPQPDS 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lqfRNP_732736.2 ENTH_epsin 27..150 CDD:239627 50/122 (41%)
DUF4045 <226..459 CDD:289995 54/259 (21%)
Telomere_reg-2 1072..1184 CDD:287202
AT3G59290NP_567079.1 ENTH_epsin 26..146 CDD:239627 49/120 (41%)
PRP38_assoc 166..252 CDD:289628 27/89 (30%)
DUF1777 175..>278 CDD:285811 28/106 (26%)
ATF7IP_BD <308..430 CDD:293393 26/148 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm3473
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12276
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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