DRSC/TRiP Functional Genomics Resources

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Protein Alignment lqfR and AT2G43160

DIOPT Version :10

Sequence 1:NP_732736.2 Gene:lqfR / 42632 FlyBaseID:FBgn0261279 Length:1415 Species:Drosophila melanogaster
Sequence 2:NP_850386.1 Gene:AT2G43160 / 818918 AraportID:AT2G43160 Length:895 Species:Arabidopsis thaliana


Alignment Length:579 Identity:163/579 - (28%)
Similarity:236/579 - (40%) Gaps:142/579 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VRELADKVTNVVMNYTETEGKVREATNDDPWGPTGPLMQELAYSTFSYETFPEVMSMLWKRMLQD 75
            ||:|..:|...|:.....|.||.:||:::||||.|.|:.:||.::.:|..:..:|.::||| |.|
plant     9 VRDLKREVNKKVLKVPGVEQKVLDATSNEPWGPHGSLLADLAQASRNYHEYQLIMVVIWKR-LSD 72

  Fly    76 NKTNWRRTYKSLLLLNYLVRNGSERVVTSSREHIYDLRSLENYTFTDEGGKDQGINVRHKVRELI 140
            ...|||..||:|.:|.|:|.:|||||:...||..|.:.:|.::.:.|.||:|||.|||.|.:.|:
plant    73 TGKNWRHVYKALTVLEYMVGHGSERVIDEIRERAYQISTLSDFQYIDSGGRDQGSNVRKKSQSLV 137

  Fly   141 DFIQDDDRLREERKKAKKNKDKYIGMSSDAMGMRSGGYSG-YSGG------SGGGGGGSGGYNDG 198
            ..:.|.:|:.|.|:||..|:|||...:...|...||||.. |..|      |..|.....||.|.
plant   138 ALVNDKERIAEVRQKAAANRDKYRSSAPGGMYKPSGGYGDKYDYGSRDEERSSYGREREYGYRDD 202

  Fly   199 DYRSSRGDNWYSDKSADKDRY-----EDDDTHYDGEREGSDSDSPSPRRNYRYNDRASPAEVASE 258
            |..|..||....|   .:|||     .|||  |.|.....|        ||....|:|..|...:
plant   203 DRNSRDGDRHSRD---SEDRYGRDGNRDDD--YRGRSRSVD--------NYGSRGRSSEREREDD 254

  Fly   259 AKPSS-----------------LNMNIRSKTVSSPVSKQPTSTASAKPALSQKKIDLGAAANFGK 306
            ...||                 |......:.:.:|.|.:...:.|..|..|::            
plant   255 GHSSSRGSGARADDNSQDGRGGLQRKFSEQNIGAPPSYEEAVSDSRSPVYSER------------ 307

  Fly   307 PAPGGAAGIHSPTHRDTPTSVDLMGGASPSPSTSKANNNTQSNNNDLLDDLFKTCSPPPGQEKTL 371
              .||          :|| .|...|.|||.|....|.               :..|||.| ..|.
plant   308 --DGG----------ETP-QVTAPGAASPPPPQVAAP---------------EAASPPTG-TNTA 343

  Fly   372 NSAAVIVDDD--------DDFNPRASDASQQEFGDFASAF--GQPSAGST--ISEPPSTGLVPA- 423
            |:.|..|::.        |:|:||             |||  |.|:..||  ::.||:...:.| 
plant   344 NTTATFVNESPSQKVETFDEFDPR-------------SAFSAGPPAYASTDGVTAPPTVTSMSAP 395

  Fly   424 --ANDEFADFAAFQGSTTSTSAL------------DGNL-------LKTATPANDSF-DLFNSAP 466
              :|....|.........|::||            :|..       ..|:.|:..|| |.|..:|
plant   396 TTSNSVEMDLLGSLADVFSSNALAIVPADSIYVETNGQANAGPAPSFSTSQPSTQSFDDPFGDSP 460

  Fly   467 TSTAAATTATDLLAGLGDLSIHQSMPMAVEEQLASSN--------DSMSS-ASPQPPSE 516
            .. |..:|.||........:..|..|.|...:::..:        ||.|: |:|.|.|:
plant   461 FK-AFTSTDTDSTPQQNFGASFQPPPPAFTSEVSHPDTAHNFGFGDSFSAVANPDPASQ 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lqfRNP_732736.2 ENTH_EpsinR 28..153 CDD:340786 52/124 (42%)
Telomere_reg-2 1072..1184 CDD:462990
AT2G43160NP_850386.1 PHA03247 <366..707 CDD:223021 39/167 (23%)
ENTH 26..142 CDD:340772 49/116 (42%)
PRK12678 142..>280 CDD:237171 44/150 (29%)
Blue background indicates that the domain is not in the aligned region.

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