DRSC/TRiP Functional Genomics Resources

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Protein Alignment lqfR and telo2

DIOPT Version :9

Sequence 1:NP_732736.2 Gene:lqfR / 42632 FlyBaseID:FBgn0261279 Length:1415 Species:Drosophila melanogaster
Sequence 2:NP_001071209.1 Gene:telo2 / 777634 ZFINID:ZDB-GENE-061103-523 Length:822 Species:Danio rerio


Alignment Length:877 Identity:215/877 - (24%)
Similarity:354/877 - (40%) Gaps:166/877 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   578 CLAHGEYAAL-----LNQLTELFSQDWPEPSQDVEVVNIFKLDHSFDYVSVAFESLQTRLDKFPS 637
            ||..||:..:     |..|....|..|...|.|.:...:.||.........|.::|.|.||    
Zfish    40 CLDDGEFTRIHHTHALQVLVSAQSSHWFSRSHDEDEEEMKKLWGEIIIRGPAEQTLLTLLD---- 100

  Fly   638 TISSLLENMVKD------ESLISIALLHI---SRQRA----SLMQRFARTIKVMPERKVEELDAQ 689
            ||||..|:...|      |..:|.|.|.:   ||..|    |...:...|:              
Zfish   101 TISSTGESEALDRCVSALEMFLSAARLQVLLWSRCEAGGASSDSPQLTETV-------------- 151

  Fly   690 VKAFFQLLISLPAQVANRLGRRLPETFAPVSYQKLLLRQWLKSLHFVLQCDDNREYFDLEPYSWL 754
                ...|.:||:..:|.|....|:.|.|..|..||....|.:|.  ..|...|...|..  ...
Zfish   152 ----IGHLAALPSITSNHLHTNTPDIFLPQQYYPLLAASILDTLE--KTCHALRAGRDCS--LGF 208

  Fly   755 LSQAINLI----YDVSTLES----LLRVLKDYAVAPRGRKVVHTILKELDPAACLKTAQS----A 807
            :||.:..:    |.....|:    |..|.::.|:..|   |...:|:.: |..|.::..:    :
Zfish   209 VSQVLGKVCIQGYSSQMFETLGPRLSSVTREDALYQR---VTQKLLENV-PERCTESVITGLIRS 269

  Fly   808 LSAGLNLYVLIGAATLETPHWKHCLLQKLPLQRTPVDNKQLITLASYLNAVAPAQ---LQVLLNQ 869
            ||....:..|:|...|.....:..|..||.||:.....:.|.::..|| ||..::   |:.:|..
Zfish   270 LSGAAAVSRLMGNLVLTNKKAQFVLTHKLILQQYQHPTRLLKSVLGYL-AVDSSRRPLLKQVLRS 333

  Fly   870 LLGIWSKRISLQKLGSQEHLAISKLLVLAAKCLCGNLVMDLNIQ--RQ-----LHDGLSNHLQSP 927
            :..:|....:::....::.|.:||.|:     ||..|:.|..||  ||     :..|:...|.|.
Zfish   334 VCQVWCNSSAVKHTCVEQQLYVSKALL-----LCVALLDDSEIQELRQEMLQCMLGGVQCRLDSN 393

  Fly   928 DALQRHVGMKTVELIFNFIALPDAKEDDRLRFEYDSFKDTFHWHIFEEFDELGQFESPSKTKLDE 992
            ....|.:||...|.:.:.:..|.:    :|:|:|.:            .:|:|:.:|        
Zfish   394 VERIRRMGMVVGECLSHRLDTPGS----QLKFQYGA------------DEEIGELKS-------- 434

  Fly   993 KPCEDQLKQLELHLSDFMSTTEQKEPHKPNIEIQANPAPE------NQNVNMQLDSDDDEPLDED 1051
                         |.:.::..:.:| .:|:......|.|:      :|:|.....:..:..||.|
Zfish   435 -------------LMESLAVNDDEE-EQPDASHSLQPEPKVEASVLSQSVASDPGNGSESELDSD 485

  Fly  1052 DDELKPYDMSNDTTTTIDQRPKFVIDLLHLLREKVENYQVFEGALGTAEQLIRGQLAKHDTQLAL 1116
            || |.|||||.|........|.:|.|.|..|... ::.:.||.:|..||.|:|..| |...::::
Zfish   486 DD-LTPYDMSADQEKKKSAPPCYVRDCLEGLMSS-DDAERFELSLQVAETLLRKNL-KATQEVSV 547

  Fly  1117 DLLQLFLVMEMQFYYEQFERTQFKCCVAICVAHPGPCAEYLCRQFHTDNSFYSASVRILILQVLA 1181
            ...::.|.:|.::....|...:....||:.|....|..:|...:|:..|  ||...|:.||:|||
Zfish   548 QFSKVLLHLEDRYNTALFLSLRQNAMVALTVTDIKPVVDYWTTEFYALN--YSLRQRLDILEVLA 610

  Fly  1182 ATAKELSGDENMQNE---MEIVDVIPPAAKHPRKFEFQQEEESPAARLAAAQRIIRDRLRAKTKR 1243
            ..|:|||  |.:.|:   .|.:..:.|..:......::|              |:..|:::||:|
Zfish   611 LAAQELS--EPLTNKHTGAEPITAVTPLGQSDDITHWRQ--------------IVDKRIQSKTRR 659

  Fly  1244 YFSKPKAGDQMEKA--NPFHPVAGTFFFSLVRGQRTRQMLYVKYENISHDI---DTQLLVNLLNT 1303
            .   .|...|..||  |.:.||||.|||.|:|.....|..:        |:   |..:|..||:|
Zfish   660 I---SKGVTQPVKAVPNRYAPVAGFFFFPLLRSYDRPQTTF--------DLLGGDHLVLGRLLHT 713

  Fly  1304 MSVLVMCSQNCPLLPAMTREIFDLCAFVRFNAEARVRAATLQLIGIALVTTPAHVLAQHFAESLN 1368
            :.:|:..:.|.|::..|.|.:.|....|||:.:..||...:..:....::.|:..|.....:.|.
Zfish   714 LGLLMHLAVNAPVVSQMGRALLDFVWAVRFHTDQMVRRGVMFAVCAVFLSMPSENLLTELGDDLM 778

  Fly  1369 ELQRWLNDFIRSPLVGGETSEECRELA-QSIL 1399
            |.:.||.|...|     :...:||.|| ||::
Zfish   779 ETRAWLADVAES-----DCDSDCRSLAVQSLM 805

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lqfRNP_732736.2 ENTH_epsin 27..150 CDD:239627
DUF4045 <226..459 CDD:289995
Telomere_reg-2 1072..1184 CDD:287202 32/111 (29%)
telo2NP_001071209.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 442..504 18/63 (29%)
Telomere_reg-2 505..613 CDD:287202 32/111 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 63 1.000 Domainoid score I10291
eggNOG 1 0.900 - - E1_KOG4346
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 133 1.000 Inparanoid score I4593
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177926at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.870

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