DRSC/TRiP Functional Genomics Resources

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Protein Alignment lqfR and Epn2

DIOPT Version :9

Sequence 1:NP_732736.2 Gene:lqfR / 42632 FlyBaseID:FBgn0261279 Length:1415 Species:Drosophila melanogaster
Sequence 2:XP_006246583.1 Gene:Epn2 / 60443 RGDID:619773 Length:652 Species:Rattus norvegicus


Alignment Length:636 Identity:166/636 - (26%)
Similarity:274/636 - (43%) Gaps:134/636 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KVTNVVMNYTETEGKVREATNDDPWGPTGPLMQELAYSTFSYETFPEVMSMLWKRMLQDNKTNWR 81
            ::.|:|.||:|.|.||||||::|||||:..||.|:|..|::...|.|:|||:||| |.|:..|||
  Rat     9 QMKNIVNNYSEAEIKVREATSNDPWGPSSSLMTEIADLTYNVVAFSEIMSMVWKR-LNDHGKNWR 72

  Fly    82 RTYKSLLLLNYLVRNGSERVVTSSREHIYDLRSLENYTFTDEGGKDQGINVRHKVRELIDFIQDD 146
            ..||:|.||:||::.|||||....||:|:.:::|:::.:.|..|||||||||.|.::|:..::|:
  Rat    73 HVYKALTLLDYLIKTGSERVAQQCRENIFAIQTLKDFQYIDRDGKDQGINVREKSKQLVALLKDE 137

  Fly   147 DRLREERKKAKKNKDKYIGMSSDAMGMRSGGYSGYSGGSGGGGGG-SGGYNDGDYRSSRGD--NW 208
            :||:.||.:|.|.|::   |:..|.|:   |.:..:.|.|..... |..|::.:|..:.|.  ::
  Rat   138 ERLKVERVQALKTKER---MAQVATGV---GSNQITFGRGSSQPNLSTSYSEQEYGKAGGSPASY 196

  Fly   209 YSDKSADKDRYEDDDTHYDGEREG-SDSDSPSPRR----------NYRYND------------RA 250
            :....|..     ...|..|...| |:...|..:|          ::...|            ||
  Rat   197 HGSPEASL-----CPQHRTGAMLGQSEELQPLSQRHPCLPHLGLASHPNGDWAQPCLTCDRAARA 256

  Fly   251 SPAEVASE---AKPSS-----LNMNIRSKTVSSPVSKQPTSTASAKPALSQKKIDLGAAANFGKP 307
            :...|:||   |:|.:     |.:.: :..:|..|::|.:.:........::::..|........
  Rat   257 TSPRVSSELEQARPQTSGEEELQLQL-ALAMSREVAEQSSESVQTARGSKEERLRRGDDLRLQMA 320

  Fly   308 APGGAAGIHSPTHRDT---PTSVDLMGGASPSPSTSKANNNTQSNNNDLLDDLFKTCSPPPGQEK 369
            .        ..:.|||   |...::.....|      .:::.|:...||:|.|  ..|.|..|:.
  Rat   321 L--------EESRRDTVKVPKKKEVKACCKP------GSHSQQTTLLDLMDAL--PSSGPVAQKT 369

  Fly   370 TLNSAAVIVDDDDDFNPRASDASQQEFGDFASAFGQPSAGSTISEP---PSTG---LVPAANDEF 428
            ...|.....:..   ||.....:.....|...:||...|.|.  :|   |:|.   .||..:|.:
  Rat   370 EPWSTGTPANQT---NPWGGTVAPANISDPWPSFGTKPAASV--DPWGVPTTASIQSVPKNSDPW 429

  Fly   429 ADFAAFQGSTTSTSALDGNLLKTATPANDSFDLFNS-------------------APTSTAAA-- 472
            |  |:.|.::.:....|.......:||:.||:||::                   .|..:.|:  
  Rat   430 A--ASQQPASDAGKTADAWGAAKPSPASGSFELFSNFNGTVKDDFSEFDNLRTSKKPAESGASVP 492

  Fly   473 -----TTATDLL--AGLGDLSIHQSMPMAVEEQLASSN------DSMSSASPQPPSEAMR--LA- 521
                 ||:.||.  ..|...|...|......|.....|      ||:.: .|.||::::.  || 
  Rat   493 PQDSRTTSPDLFESQSLTSASSKPSSARKTPESFLGPNAALVNLDSLVT-KPNPPAQSLNPFLAP 556

  Fly   522 ----------FSKAQKQLRDLMQVQSASAVAQVAAILGELHNSNALPGFTT 562
                      |...|.|...|.|::.       :.:||...:..:.||..|
  Rat   557 GAAAPAPVNPFQVNQPQPLTLNQLRG-------SPVLGSSASFGSGPGVET 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lqfRNP_732736.2 ENTH_epsin 27..150 CDD:239627 61/122 (50%)
DUF4045 <226..459 CDD:289995 51/272 (19%)
Telomere_reg-2 1072..1184 CDD:287202
Epn2XP_006246583.1 ENTH_Epsin 19..141 CDD:340787 61/122 (50%)
TM_PBP2 404..>468 CDD:412373 18/67 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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