DRSC/TRiP Functional Genomics Resources

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Protein Alignment lqfR and epn2

DIOPT Version :9

Sequence 1:NP_732736.2 Gene:lqfR / 42632 FlyBaseID:FBgn0261279 Length:1415 Species:Drosophila melanogaster
Sequence 2:XP_686465.3 Gene:epn2 / 560542 ZFINID:ZDB-GENE-071212-1 Length:590 Species:Danio rerio


Alignment Length:634 Identity:165/634 - (26%)
Similarity:269/634 - (42%) Gaps:157/634 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KVTNVVMNYTETEGKVREATNDDPWGPTGPLMQELAYSTFSYETFPEVMSMLWKRMLQDNKTNWR 81
            ::.|||.||:|.|.||||||::|||||:..||.|:|..|::...|.|:|||:||| |.|:..|||
Zfish     9 QMKNVVNNYSEPEKKVREATSNDPWGPSSSLMSEIADLTYNVVAFSEIMSMIWKR-LNDHGKNWR 72

  Fly    82 RTYKSLLLLNYLVRNGSERVVTSSREHIYDLRSLENYTFTDEGGKDQGINVRHKVRELIDFIQDD 146
            ..||:|.||:||::.|||||....:|:|:.:::|:::.:.|..|||||||||.|.::|:..::||
Zfish    73 HVYKALTLLDYLIKTGSERVALQCKENIFAIQTLKDFQYIDRDGKDQGINVREKSKQLVVLLKDD 137

  Fly   147 DRLREERKKAKKNKDKYIGMSSDAMGMRSGGYSGYSGGSGGGGGGSGGYNDGDYRSSRGDNWYSD 211
            |||:.||.:|.|.|::   |:..|..:.|....|:.                  |.|...|..:.
Zfish   138 DRLKGERSQALKTKER---MAQVATSVGSNNQIGFG------------------RGSSQPNLSTS 181

  Fly   212 KSADKDRYEDDDTHYDGEREGSDSDSPSPRRNYRYNDR--------ASPAEVASEAKPSSLNMNI 268
            .|.:..:.|.....|.|....:.|......|.....:.        |...|.|.:.:......::
Zfish   182 YSEEYGKSEGSPASYHGSTSPNASSELEQARPQTSGEEELQLQLALAMSREAAEQEERMRRGDDL 246

  Fly   269 RSKTVSSPVSKQPTSTASAKPALSQKK--------IDLGAA-----ANFG-KPAPGGAAGIHSPT 319
            |.: ::...|::.|||..    :|:||        :||..|     ||.| .|...|||....||
Zfish   247 RLQ-MALEESRKDTSTGK----VSKKKKEPPQSSLMDLMDAVPEGHANQGTDPWGAGAAAAAGPT 306

  Fly   320 HRDTPTSVDLMGGASPSPSTSKANNNTQSNNNDLLDDLFKTCSPP-----PGQEKTLNSAAVIVD 379
             .|...|.    ||:|.|:                       :|.     ||    .:|:|..|.
Zfish   307 -SDPWQSY----GAAPKPA-----------------------APVDPWGLPG----ASSSATPVK 339

  Fly   380 DDDDFNPRASDASQQEFGDFASAFGQPSAGSTI------SEPPSTGLVPAANDEFADFAAFQGST 438
            ..|.:...::.|:...:|...:.  :|.|.:|:      |.|..     ::.::|::|.:.:.|.
Zfish   340 STDPWGSSSAPAAADPWGPMPAT--RPKAPATVGSFDLFSTPNG-----SSREDFSEFDSIRSSA 397

  Fly   439 TSTSALDGNLLKTATPANDSFDLFN--SAPTSTAAATTATDLL---AGLGDLSIHQSMPMAVEEQ 498
            .:......:.|.:....:...|||.  |.||    ..|....|   |.|.:|....|.|:   :|
Zfish   398 LTGDGRGSSALPSQASLSIGSDLFEVPSGPT----RKTPESFLGPNAALVNLDSLVSKPL---QQ 455

  Fly   499 LASSNDSMSSAS-------------------------PQPPS-EAMRLA---------FSKAQKQ 528
            ...||..::.||                         ||||: ..||::         |:...::
Zfish   456 APVSNPFLAGASGVASAPVPAPAPAPAAQVNPFQVNQPQPPTLNQMRVSPMMGMSAQGFNSMIQR 520

  Fly   529 LRDLMQVQSASAVAQVAAI----------LGELHNSNALPGFTTPEQLV 567
            ..:.:.:.|......|:.:          :|::..|..:|. :.|:.|:
Zfish   521 SNEPLPLSSLPPGGPVSMVPMTGMAPLGPMGQMMPSMGIPA-SMPQPLM 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lqfRNP_732736.2 ENTH_epsin 27..150 CDD:239627 62/122 (51%)
DUF4045 <226..459 CDD:289995 51/265 (19%)
Telomere_reg-2 1072..1184 CDD:287202
epn2XP_686465.3 ENTH_epsin 19..141 CDD:239627 62/122 (51%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2102
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

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