DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lqfR and Enthd1

DIOPT Version :9

Sequence 1:NP_732736.2 Gene:lqfR / 42632 FlyBaseID:FBgn0261279 Length:1415 Species:Drosophila melanogaster
Sequence 2:NP_001156661.1 Gene:Enthd1 / 383075 MGIID:2686088 Length:618 Species:Mus musculus


Alignment Length:639 Identity:162/639 - (25%)
Similarity:250/639 - (39%) Gaps:163/639 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KVTNVVMNYTETEGKVREATNDDPWGPTGPLMQELAYSTFSYETFPEVMSMLWKRMLQDNKTNWR 81
            :|.|.|.||::.|.||||||::|||||:..||..::..||:..:..|:|.|||:| |.|:..|||
Mouse     6 QVKNFVKNYSDAEKKVREATSNDPWGPSSSLMLAISDMTFNAASLSEIMHMLWQR-LSDHGKNWR 69

  Fly    82 RTYKSLLLLNYLVRNGSERVVTSSREHIYDLRSLENYTFTDEGGKDQGINVRHKVRELIDFIQDD 146
            ..||||.|::||::|||.:|:...||.:.:|:.|:::...||.|||||..:|.:.:::|..:.|:
Mouse    70 HVYKSLALMDYLIKNGSRKVIQYCREGVCNLQMLKDFQHIDEAGKDQGHYIRERSKQVITLLMDE 134

  Fly   147 DRLREERKKAKKNKDKYIGMSSDAMGMRSGGYSGYSGGSGGGGG-------------GSGGYNDG 198
            ..|.:||:.|...:.:           .|...|..|..|..|..             .|...:..
Mouse   135 QLLHKEREVATWTRQR-----------TSYSMSFPSRLSATGTSPTVCTSVLIPESLTSEKKHSQ 188

  Fly   199 DYRSSRGDNWYSDKSADKDRYEDDDTHYDGEREGSDSDSPSPRRN-------------------- 243
            |.:.:.|  ..|.|:..|.|.          |.....|.|||...                    
Mouse   189 DCKKTAG--LCSKKNTSKARL----------RLEQCQDVPSPAGTSLPLYFPSLGMKAWKSTEDL 241

  Fly   244 ---YRYN-----------DRASPAEVASEAKPSSLNMNIRSKTVSSPVSKQP---TSTASAK--- 288
               |.|.           ...|||...||.:....|: ..::.||:|..|.|   ||.:..|   
Mouse   242 TLLYSYEHPKQPVTRLPPSFTSPASWLSEGEAEICNL-WDTEAVSTPPEKNPSMQTSVSLGKKLE 305

  Fly   289 -----------PALSQKKIDLGAAANFGKPAPGGAAGIHSPTHRDTPTSVDLMGGASPSPSTSKA 342
                       |...|:|  ..||.:|..|.|..|   ..|:.:|...|:.|      ..|.|::
Mouse   306 SAIANTITESPPQTPQEK--QMAAKSFEMPTPLPA---FWPSGKDEFVSLAL------RMSKSES 359

  Fly   343 NNNTQSNNNDL-LDDLFKTCSPPPGQEKTLNSAA--VIVDDDD----------DFNPRASDASQQ 394
            ..:|||:...| :...|||.||.....:.|.:.|  .|...:|          ::.|:.:..:..
Mouse   360 IFHTQSSVETLYVSPTFKTISPLNETSQDLQTPAQFSICQMEDVCLKPLAMRGEWTPKQASEAVS 424

  Fly   395 EFGDFASAFGQPSAGSTIS-EPPSTG--------LVPA-ANDEFADFAAFQGSTTSTSALDGNLL 449
            ...:.||:|      ||:| .||...        .:|. |:..|  :...|..:.|....|.|  
Mouse   425 AASEVASSF------STLSISPPDLAHPEKSARCFIPVMASSSF--WTLPQPQSPSDPLTDQN-- 479

  Fly   450 KTATPANDSFDLFNSAPTSTAAATTATDLLAGLGDLSIHQSMPMAVEEQLASSNDSMSSAS---- 510
             .|......|     ||||||::           |...:.|:|...:..:...:.|.||..    
Mouse   480 -EAVRVRHPF-----APTSTASS-----------DNEEYPSLPDNSDSTMKEPSYSFSSGRGAFS 527

  Fly   511 -------PQPPSEAMRLAFSKAQKQLRDLMQVQSASAVAQVAAILGELHNSNAL 557
                   |..|..:.|  |.::....||.......:.:.:|.:.:..||:..:|
Mouse   528 TLTRAHFPGLPQASFR--FQESAGLSRDSESRAICTLLGEVKSAVVRLHDDLSL 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lqfRNP_732736.2 ENTH_epsin 27..150 CDD:239627 52/122 (43%)
DUF4045 <226..459 CDD:289995 66/306 (22%)
Telomere_reg-2 1072..1184 CDD:287202
Enthd1NP_001156661.1 ENTH_Epsin 16..139 CDD:340787 53/123 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.