DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13850 and tbrg4

DIOPT Version :9

Sequence 1:NP_001262834.1 Gene:CG13850 / 42630 FlyBaseID:FBgn0038961 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001004904.2 Gene:tbrg4 / 448262 XenbaseID:XB-GENE-969727 Length:633 Species:Xenopus tropicalis


Alignment Length:535 Identity:133/535 - (24%)
Similarity:224/535 - (41%) Gaps:66/535 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 ESKSQASSKI-DERI--INAKTVNGLLTITENNNGFSRKHALRIVSILAEWSTLNRVKISEFEND 139
            |||:|..|.: |||.  :..:..|.:.||. |.|..|....|.|:.|..:...|..|     ||:
 Frog   114 ESKAQGGSVVQDERFQQLLVQAHNQISTIW-NGNLVSLLKRLYILGIREDNKQLQAV-----ENE 172

  Fly   140 TRFLRICRM-----------------------LGRTVPKNNNANNKDLGDNGTAKRI------SG 175
            .|: |:.|:                       |...:.||......::.|   ||.:      .|
 Frog   173 VRW-RLRRLSFKSLVQLSDLYVTFTRSPEQKHLVSDLVKNLELRWTEIED---AKSVVTLMTRVG 233

  Fly   176 FRTDDLNTVLGVAGDDEAAKLIASISLPQMVKVMSTLAQRKRRSTPLLRSLAFNISSASESLDLK 240
            |.:..|...|    :|:|.:.....:..:|.||...||.:.||:.||||:|::::......|...
 Frog   234 FISKALMEKL----EDKALEYAEQFTPDEMRKVALALAAQNRRTVPLLRALSYHLVQRHIGLSPA 294

  Fly   241 QAGDVLFAMSTLNFQDSVLGAKVCADVQSALPKNVEKSA-VVGSIITSLGILRYRDLDILESLTQ 304
            ...|:.||...|||..:.:..|:.:|:   |||..|.|| .:...:.|...|::.:|.:.|:..|
 Frog   295 VVVDLAFAYGKLNFHQTQVFQKMASDL---LPKVPEMSANDIARCVKSFAYLKWSNLPLFEAFAQ 356

  Fly   305 WLLKNSEICRPQDLSAYFLTSALLNFKSAQLEEVSKKLVKSIVRE-DFTKQSEWLSFVWSLTMLG 368
            ..:..||......|....|....|||:.::.||....:.:.:..| |.......:..||||.:|.
 Frog   357 ASIDQSEKFTVPQLCNLVLAFGRLNFQPSKREEFYSMMHQKLHAELDLLDPYLLVDIVWSLCVLR 421

  Fly   369 LVEHGHLASVLSADFLETLKKDKAGVTATSKMRLLNLNSYAQLIATDYKGPLLPTDSPVYQVPMA 433
            .|:..:::.||..........|.:..:|..:::|.::|:.|.|...:|.||.||.:|......:.
 Frog   422 QVDSSYISKVLEPGLYSRFFTDSSPRSANYRLKLAHINATALLEHPEYTGPHLPNESISTTHAVT 486

  Fly   434 HPKAKQVLVNGMLDALKSLLPASNHLQTAVDTKMGFLIDALCHFDANKNPLPL-DKENPN----- 492
            ..:....|.:|:.:.|:.|.|.....:..|:|..|:.||.....|::..||.| |.|.|:     
 Frog   487 ANRKLSPLQSGLQEVLRELFPVEGTCRCGVNTVYGWYIDGEVVLDSDNKPLSLMDLEAPHLPHSQ 551

  Fly   493 --------AIRVALMVIDFHDICHGTHRSGSGVTNLTFDLLEKSGYHVIPVPYNEFSTSDKLLKR 549
                    ..|.|.:..||.:. :...:...|...||...|:.:|:.|:.|||.|:.......::
 Frog   552 GKKPLPEGTRRFAFVAWDFPNF-NSRSKDLLGRFVLTRRHLQAAGFLVVEVPYYEWLDLKSEWQK 615

  Fly   550 VQYLESKFKAIASSK 564
            ..||:.|...:.:.:
 Frog   616 SAYLKDKINKVVAEE 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13850NP_001262834.1 FAST_1 319..385 CDD:284217 16/66 (24%)
FAST_2 402..484 CDD:285557 21/81 (26%)
RAP 498..556 CDD:214932 14/57 (25%)
tbrg4NP_001004904.2 FAST_1 371..439 CDD:399608 16/67 (24%)
FAST_2 453..537 CDD:400599 21/83 (25%)
RAP 565..622 CDD:214932 14/57 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I12318
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 114 1.000 Inparanoid score I4699
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1209476at2759
OrthoFinder 1 1.000 - - FOG0008087
OrthoInspector 1 1.000 - - oto104889
Panther 1 1.100 - - LDO PTHR21228
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5372
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.100

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