DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13850 and CG2124

DIOPT Version :9

Sequence 1:NP_001262834.1 Gene:CG13850 / 42630 FlyBaseID:FBgn0038961 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_572638.1 Gene:CG2124 / 31989 FlyBaseID:FBgn0030217 Length:629 Species:Drosophila melanogaster


Alignment Length:572 Identity:101/572 - (17%)
Similarity:196/572 - (34%) Gaps:175/572 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 NRVKI----SEFENDTRFLRICRMLGR----------------TVPKNNNANNK----DLGDNGT 169
            ||:::    |.:|..||.  .|..|.|                .||::..|.|.    :..|...
  Fly    92 NRMELKISDSRYEAFTRC--FCEQLHRLTDEQLLGSLSALAELPVPESPKAKNYMEIWNTLDIEC 154

  Fly   170 AKRISGFRTDDLNTVLGVAGDDEAAKLIASISLPQMVKVMSTLAQRKRRSTP------------L 222
            .:||..:.::.|..|      .:|...:..:.:.:.|.:......||.|..|            |
  Fly   155 CRRIERWSSEQLLLV------SDAWYRLGLVRIGEYVWLALKKLGRKLRKLPPEQLVHSMFLCNL 213

  Fly   223 LRSLAF-------NISSASESLDLKQAGDVLFAMSTLNFQDSVLGAKVCADVQSALPKNVEKSAV 280
            ||...|       |::...:.:.|.:.|  :.||.....|..:...::...:...|...::....
  Fly   214 LRRPVFEMFDFELNLARCVDQMTLSELG--VMAMGFFKTQTPIRNPELLTQLYQRLGSELDTVED 276

  Fly   281 VGSIITSLGILRY-----------RDLDILES--------------------------LTQWLL- 307
            : .::..|.:|||           :.|..|||                          |.:.:| 
  Fly   277 I-VLVALLKVLRYSSKLPQVEPLKKMLSALESQVDRVSLLTCLHMALLGCELQTCNDALVERILL 340

  Fly   308 ---KNSEICRPQDLSAYFLTSALLNF--KSA-------QLEEVSKKLVKSIVRED--FTKQSEWL 358
               :..|..|.:|:....|..||.|.  ||.       :|.::.::.::.|:|..  |   |..|
  Fly   341 RFERELETARLKDMERICLVMALFNITTKSGVERRLAERLPDLLRQRIEEILRHPRCF---SNCL 402

  Fly   359 SFVWSLTMLGLVEHGHLASVLSADFLETLKKDKAGVTATSKMRLLNLNSYAQLIATDYKGPLLPT 423
            .|   |||.|:.:...|...|...||:     .|..:........:|:.:|:|:..:|:|.|: |
  Fly   403 QF---LTMRGVYDLELLGVALEPRFLK-----HAYPSGLPGREYFHLDGFARLLGPEYQGALV-T 458

  Fly   424 DSPVYQ--------VPMAHPKAK-----QVLVNGMLDAL---------KSLLPASNHLQTAVDTK 466
            :....|        :|....:.|     ::||. :.||:         |.:||..:....     
  Fly   459 EKQRQQMGRNYTQYIPDRDGRFKLNNTDRILVE-IRDAITMIHRPVTFKHILPQYDRCDV----- 517

  Fly   467 MGFLIDALCHFDANKNPLPLDKE----------------------NPNAIRVALMVIDFHDICHG 509
                  .||:....:..|.::.|                      :...:.|.:::..::::...
  Fly   518 ------VLCYDRRQRKALSINGEACQDYSGEILTRKHLLGERKAADDQLVTVVIVIAGWNNVIRD 576

  Fly   510 THRSGSGVTNLTFDLLEKSGYHVIPVPYNEFSTSDKLLKRVQYLESKFKAIA 561
            ..|. :|..::....|.:.|:..:.:.::|:...:....|..:|:.:...||
  Fly   577 KDRF-TGQMDMKLRQLRQLGHQPLVIYWHEWRELENSADRQDFLKRRLSQIA 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13850NP_001262834.1 FAST_1 319..385 CDD:284217 20/76 (26%)
FAST_2 402..484 CDD:285557 19/103 (18%)
RAP 498..556 CDD:214932 7/57 (12%)
CG2124NP_572638.1 RAP 565..622 CDD:214932 7/57 (12%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21228
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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