DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13850 and Tbrg4

DIOPT Version :9

Sequence 1:NP_001262834.1 Gene:CG13850 / 42630 FlyBaseID:FBgn0038961 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001123929.1 Gene:Tbrg4 / 21379 MGIID:1100868 Length:630 Species:Mus musculus


Alignment Length:444 Identity:117/444 - (26%)
Similarity:197/444 - (44%) Gaps:89/444 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 ISGFRTDDLNTVLGVAG----------DDEAAKLIASISLPQMVKVMSTLAQRKRRSTPLLRSLA 227
            |:..||  |.|::.:||          :|:..:|:......::.||:.|||.:.|||.||||:::
Mouse   216 INDSRT--LVTMMTMAGHLSESLMNHLEDKCLELVEQFGPDELRKVLVTLAAQSRRSVPLLRAIS 278

  Fly   228 FNISSASESLDLKQAGDVLFAMSTLNFQDSVLGAKVCAD----VQSALPKNVEKSAVVGSIITSL 288
            :::......:......|:.:|...|:|..:.:..::.||    :.|..|..|.:.|      .|.
Mouse   279 YHLVQKPFPMTKGMLLDLAYAYGKLSFHQTQVSQRLAADLLPFIPSMTPGEVARCA------KSF 337

  Fly   289 GILRYRDLDILESLTQWLLKNSEICRPQDLS-----AYFLTSALLNFKSAQLEE-----VSKKLV 343
            ..|::.:|.:.|:.||.||.     |.||:|     :..|..|.|||...|.|:     |.:||.
Mouse   338 AFLKWLNLPLFEAFTQHLLS-----RVQDVSLSHVCSVLLAFARLNFHPEQEEDQFFSMVHEKLD 397

  Fly   344 KSIVREDFTKQSEWLSFVWSLTMLGLVEHGHLASV----LSADFLETLKKDKAGVTATSKMRLLN 404
            ..:...:...|   :..||:|.:|..|....|.:|    |.|.|||:    |:....::..:|::
Mouse   398 PVLGSLEPALQ---VDLVWALCVLQHVHETELHTVLHPGLHARFLES----KSPKDQSTFQKLVH 455

  Fly   405 LNSYAQLIATDYKGPLLPTDSPVYQVPMAHPKAKQVLVNGMLDALKSLLPASNHLQTAVDTKMGF 469
            :|:.|.|...:||||.||. |.|..:|....|....|...:.:.||:||..::.....|.|:.|:
Mouse   456 INTTALLEHPEYKGPFLPA-SAVAPIPSPSNKKMTPLQKELQETLKALLGNTDKGSLEVATQYGW 519

  Fly   470 LIDALCHFDANKNPLPLDKEN----------------PNAIRVALMVIDFHDICHGTHRSGSGVT 518
            ::||....||:.:.|||  .|                |.|.|:|.:..:|.:.           .
Mouse   520 VLDAEVLLDADGHFLPL--RNFVAPHLAQPVGNQPLPPGAKRIAFLRWEFPNF-----------N 571

  Fly   519 NLTFDLLEK----------SGYHVIPVPYNEFSTSDKLLKRVQYLESKF-KAIA 561
            :.:.|||.:          :|:.|:.|||.|:.......::..||:.|. ||:|
Mouse   572 SRSKDLLGRFVLARRHVLAAGFLVVDVPYYEWLDLKSEWQKSAYLKDKMRKAMA 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13850NP_001262834.1 FAST_1 319..385 CDD:284217 22/79 (28%)
FAST_2 402..484 CDD:285557 26/81 (32%)
RAP 498..556 CDD:214932 12/67 (18%)
Tbrg4NP_001123929.1 FAST_1 368..437 CDD:369059 19/71 (27%)
FAST_2 453..534 CDD:369835 26/81 (32%)
RAP 562..619 CDD:214932 12/67 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 42 1.000 Domainoid score I12434
eggNOG 1 0.900 - - E1_28M88
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 99 1.000 Inparanoid score I4999
Isobase 1 0.950 - 0 Normalized mean entropy S8259
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0008087
OrthoInspector 1 1.000 - - oto94696
orthoMCL 1 0.900 - - OOG6_110156
Panther 1 1.100 - - LDO PTHR21228
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5372
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.800

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