DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpdh3 and GPD2

DIOPT Version :10

Sequence 1:NP_732726.2 Gene:Gpdh3 / 42624 FlyBaseID:FBgn0263048 Length:1304 Species:Drosophila melanogaster
Sequence 2:NP_014582.1 Gene:GPD2 / 854095 SGDID:S000005420 Length:440 Species:Saccharomyces cerevisiae


Alignment Length:354 Identity:130/354 - (36%)
Similarity:200/354 - (56%) Gaps:20/354 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KICIIGAEGWGSAIAAVVSNNV-LEGD-FDSRVHLYVYDEMIRDTALSEIINTRHENVKYLPGIK 68
            |:.:||:..||:.||.|::.|. |... |:..|.::|:||.|.|..|::||||||:||||||.|.
Yeast    85 KVTVIGSGNWGTTIAKVIAENTELHSHIFEPEVRMWVFDEKIGDENLTDIINTRHQNVKYLPNID 149

  Fly    69 LPNNLIAVNDLLEAAQNADILVFSTPLEFVQSYCNILSGNVKESAFAVSMTKGLLSENG-EGIEL 132
            ||:||:|..|||.:.:.||||||:.|.:|:.:....|.|:|.....|:|..||.  |.| :|::|
Yeast   150 LPHNLVADPDLLHSIKGADILVFNIPHQFLPNIVKQLQGHVAPHVRAISCLKGF--ELGSKGVQL 212

  Fly   133 VSHAISESLGIPCYSMMSAHSAMEMAQGKLCEVTI---------GCSDNSHSKLLISAMQTNNCR 188
            :|..:::.|||.|.::..|:.|.|:|:....|.|:         |...:...|:|..........
Yeast   213 LSSYVTDELGIQCGALSGANLAPEVAKEHWSETTVAYQLPKDYQGDGKDVDHKILKLLFHRPYFH 277

  Fly   189 VISVNDVDGVELCGTLTDVVALGAGFIDGLRLGENARLAAIHLGVKEIMRFIKTFFPSSKMSTFY 253
            |..::||.|:.:.|.|.:||||..||::|:..|.||..|...||:.||::|.:.|||.||:.|:|
Yeast   278 VNVIDDVAGISIAGALKNVVALACGFVEGMGWGNNASAAIQRLGLGEIIKFGRMFFPESKVETYY 342

  Fly   254 -ESCGVTNAVASSFVDKNVTFAKSLVTSGQTIEEIEANLHSGRKLLGPMVASNVNAFLENGLMQH 317
             ||.||.:.:.:....:||..|..:..:|::..|.|..|.:|:...|.:....|:.:|:...:..
Yeast   343 QESAGVADLITTCSGGRNVKVATYMAKTGKSALEAEKELLNGQSAQGIITCREVHEWLQTCELTQ 407

  Fly   318 EFPLFTAIHLI----CQSEAPPELMIEAL 342
            |||||.|::.|    .:.|..|| |||.|
Yeast   408 EFPLFEAVYQIVYNNVRMEDLPE-MIEEL 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpdh3NP_732726.2 glycerol3P_DH 6..342 CDD:274551 129/352 (37%)
COG5022 <463..952 CDD:227355
Mplasa_alph_rch <540..730 CDD:275316
PRK13729 914..>1153 CDD:184281
GPD2NP_014582.1 glycerol3P_DH 85..432 CDD:274551 126/349 (36%)
Blue background indicates that the domain is not in the aligned region.

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