DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gpdh3 and Gpd1l

DIOPT Version :10

Sequence 1:NP_732726.2 Gene:Gpdh3 / 42624 FlyBaseID:FBgn0263048 Length:1304 Species:Drosophila melanogaster
Sequence 2:NP_780589.3 Gene:Gpd1l / 333433 MGIID:1289257 Length:351 Species:Mus musculus


Alignment Length:350 Identity:147/350 - (42%)
Similarity:220/350 - (62%) Gaps:7/350 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AGKLKICIIGAEGWGSAIAAVVSNNV--LEGDFDSRVHLYVYDEMIRDTALSEIINTRHENVKYL 64
            |..||:||:|:..||||:|.::.:||  |: .|.|.|.::|::|.:....|::|||..|||||||
Mouse     3 AAPLKVCIVGSGNWGSAVAKIIGSNVKTLQ-KFSSTVKMWVFEETVNGRKLTDIINNDHENVKYL 66

  Fly    65 PGIKLPNNLIAVNDLLEAAQNADILVFSTPLEFVQSYCNILSGNVKESAFAVSMTKGLLSENGEG 129
            ||.|||.|::||.:|.||.|:||:|||..|.:|:...|:.::|.|.|.|..:::.|| :.|..:|
Mouse    67 PGHKLPENVVAVPNLSEAVQDADLLVFVIPHQFIHKICDEITGRVPEKALGITLIKG-IDEGPDG 130

  Fly   130 IELVSHAISESLGIPCYSMMSAHSAMEMAQGKLCEVTIGCSDNSHSKLLISAMQTNNCRVISVND 194
            ::|:|..|.|.:||....:|.|:.|.|:|..|.||.|||.....:..|....:||.|.|:..|:|
Mouse   131 LKLISDIIREKMGIDISVLMGANIASEVAAEKFCETTIGSKVMQNGLLFKELLQTPNFRITVVDD 195

  Fly   195 VDGVELCGTLTDVVALGAGFIDGLRLGENARLAAIHLGVKEIMRFIKTFFPSS-KMSTFYESCGV 258
            .|.|||||.|.::||:||||.||||.|:|.:.|.|.||:.|::.|.|.|.... ..:||.|||||
Mouse   196 ADTVELCGALKNIVAVGAGFCDGLRCGDNTKAAVIRLGLMEMIAFAKIFCKGQVSTATFLESCGV 260

  Fly   259 TNAVASSFVDKNVTFAKSLVTSGQTIEEIEANLHSGRKLLGPMVASNVNAFL-ENGLMQHEFPLF 322
            .:.:.:.:..:|...|::...:|:||||:|..|.:|:||.||..::.|...| :.||:. :||||
Mouse   261 ADLITTCYGGRNRRVAEAFARTGKTIEELEKELLNGQKLQGPQTSAEVYRILRQKGLLD-KFPLF 324

  Fly   323 TAIHLICQSEAPPELMIEALRNHPD 347
            ||::.||....|...|:..|::||:
Mouse   325 TAVYQICYEGRPVTQMLSCLQSHPE 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpdh3NP_732726.2 glycerol3P_DH 6..342 CDD:274551 142/339 (42%)
COG5022 <463..952 CDD:227355
Mplasa_alph_rch <540..730 CDD:275316
PRK13729 914..>1153 CDD:184281
Gpd1lNP_780589.3 glycerol3P_DH 7..344 CDD:274551 142/339 (42%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.