DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpdh3 and gpd1b

DIOPT Version :10

Sequence 1:NP_732726.2 Gene:Gpdh3 / 42624 FlyBaseID:FBgn0263048 Length:1304 Species:Drosophila melanogaster
Sequence 2:NP_956000.1 Gene:gpd1b / 325181 ZFINID:ZDB-GENE-030131-3906 Length:350 Species:Danio rerio


Alignment Length:350 Identity:154/350 - (44%)
Similarity:223/350 - (63%) Gaps:5/350 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAGKLKICIIGAEGWGSAIAAVVSNNVLE-GDFDSRVHLYVYDEMIRDTALSEIINTRHENVKYL 64
            ||.| ||||||:..||||||.:|..|..: ..|::.|:::|::|||....|:|||||.|||||||
Zfish     1 MAAK-KICIIGSGNWGSAIAKIVGANAAKYNTFENTVNMWVFEEMINGRKLTEIINTEHENVKYL 64

  Fly    65 PGIKLPNNLIAVNDLLEAAQNADILVFSTPLEFVQSYCNILSGNVKESAFAVSMTKGLLSENGEG 129
            ||.|||.|::||.||||:.:.||||:|..|.:||...|:.:.|::|..|..:|:.|| :.|..:|
Zfish    65 PGHKLPPNVLAVPDLLESVKGADILIFVIPHQFVSRICDTIKGHIKPDAVGMSLIKG-VDEGPDG 128

  Fly   130 IELVSHAISESLGIPCYSMMSAHSAMEMAQGKLCEVTIGCSDNSHSKLLISAMQTNNCRVISVND 194
            ::|:|..|.|.|||....:|.|:.|.|:|..|.||.||||....|..||...|||.|.||..|.:
Zfish   129 LKLISDVIREKLGITMTVLMGANLANEVADEKFCETTIGCKSKPHGPLLKELMQTQNFRVTVVEE 193

  Fly   195 VDGVELCGTLTDVVALGAGFIDGLRLGENARLAAIHLGVKEIMRFIKTFFPSSKMS--TFYESCG 257
            .|.||:||.|.::||:||||.|||..|:|.:.|.|.||:.|::.|.:.|..:|.:|  ||.||||
Zfish   194 ADVVEICGALKNIVAVGAGFCDGLSFGDNTKAAVIRLGLMEMIAFARLFCTASPVSPATFLESCG 258

  Fly   258 VTNAVASSFVDKNVTFAKSLVTSGQTIEEIEANLHSGRKLLGPMVASNVNAFLENGLMQHEFPLF 322
            |.:.:.:.:..:|....::...:|::|||:|..:.:|:||.||..|:.|:..|::..:..:||||
Zfish   259 VADLITTCYGGRNRKVGEAFARTGKSIEELEKEMLNGQKLQGPATAAEVHQILKHKNLVEKFPLF 323

  Fly   323 TAIHLICQSEAPPELMIEALRNHPD 347
            .|::.||....|.:..|..|:|||:
Zfish   324 NAVYQICFQNHPVKEFIMCLQNHPE 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpdh3NP_732726.2 glycerol3P_DH 6..342 CDD:274551 147/338 (43%)
COG5022 <463..952 CDD:227355
Mplasa_alph_rch <540..730 CDD:275316
PRK13729 914..>1153 CDD:184281
gpd1bNP_956000.1 glycerol3P_DH 5..343 CDD:274551 147/338 (43%)
Blue background indicates that the domain is not in the aligned region.

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