DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpdh3 and GPD1

DIOPT Version :10

Sequence 1:NP_732726.2 Gene:Gpdh3 / 42624 FlyBaseID:FBgn0263048 Length:1304 Species:Drosophila melanogaster
Sequence 2:NP_005267.2 Gene:GPD1 / 2819 HGNCID:4455 Length:349 Species:Homo sapiens


Alignment Length:350 Identity:154/350 - (44%)
Similarity:226/350 - (64%) Gaps:6/350 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAGKLKICIIGAEGWGSAIAAVVSNNVLE-GDFDSRVHLYVYDEMIRDTALSEIINTRHENVKYL 64
            ||.| |:||:|:..||||||.:|..|..: ..||.||.::|::|.|....|:|||||:|||||||
Human     1 MASK-KVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYL 64

  Fly    65 PGIKLPNNLIAVNDLLEAAQNADILVFSTPLEFVQSYCNILSGNVKESAFAVSMTKGLLSENGEG 129
            ||.|||.|::||.|:::||::||||:|..|.:|:...|:.|.|::|.:|..:|:.|| :.|...|
Human    65 PGHKLPPNVVAVPDVVQAAEDADILIFVVPHQFIGKICDQLKGHLKANATGISLIKG-VDEGPNG 128

  Fly   130 IELVSHAISESLGIPCYSMMSAHSAMEMAQGKLCEVTIGCSDNSHSKLLISAMQTNNCRVISVND 194
            ::|:|..|.|.||||...:|.|:.|.|:|..|.||.||||.|.:..:||...|||.|.|:..|.:
Human   129 LKLISEVIGERLGIPMSVLMGANIASEVADEKFCETTIGCKDPAQGQLLKELMQTPNFRITVVQE 193

  Fly   195 VDGVELCGTLTDVVALGAGFIDGLRLGENARLAAIHLGVKEIMRFIKTFF--PSSKMSTFYESCG 257
            ||.||:||.|.:|||:||||.|||..|:|.:.|.|.||:.|::.|.|.|.  |.|. :||.||||
Human   194 VDTVEICGALKNVVAVGAGFCDGLGFGDNTKAAVIRLGLMEMIAFAKLFCSGPVSS-ATFLESCG 257

  Fly   258 VTNAVASSFVDKNVTFAKSLVTSGQTIEEIEANLHSGRKLLGPMVASNVNAFLENGLMQHEFPLF 322
            |.:.:.:.:..:|...|::...:|::||::|..|.:|:||.||..|..:.:.|::..:..:||||
Human   258 VADLITTCYGGRNRKVAEAFARTGKSIEQLEKELLNGQKLQGPETARELYSILQHKGLVDKFPLF 322

  Fly   323 TAIHLICQSEAPPELMIEALRNHPD 347
            .|::.:|....|....|..|:|||:
Human   323 MAVYKVCYEGQPVGEFIHCLQNHPE 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpdh3NP_732726.2 glycerol3P_DH 6..342 CDD:274551 147/338 (43%)
COG5022 <463..952 CDD:227355
Mplasa_alph_rch <540..730 CDD:275316
PRK13729 914..>1153 CDD:184281
GPD1NP_005267.2 glycerol3P_DH 5..342 CDD:274551 147/338 (43%)
Blue background indicates that the domain is not in the aligned region.

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