DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpdh3 and gpd2

DIOPT Version :10

Sequence 1:NP_732726.2 Gene:Gpdh3 / 42624 FlyBaseID:FBgn0263048 Length:1304 Species:Drosophila melanogaster
Sequence 2:NP_594542.1 Gene:gpd2 / 2541502 PomBaseID:SPAC23D3.04C Length:373 Species:Schizosaccharomyces pombe


Alignment Length:350 Identity:129/350 - (36%)
Similarity:193/350 - (55%) Gaps:13/350 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LKICIIGAEGWGSAIAAVVSNNVLEGD--FDSRVHLYVYDEMI----RDTALSEIINTRHENVKY 63
            :.:.|||:..||:|||.:...|.....  |..:||:::|:|.|    ::..|:|:.||.||||||
pombe    25 ISVGIIGSGNWGTAIAKICGENAKAHPDIFHPQVHMWMYEEKIQHEGKECNLTEVFNTTHENVKY 89

  Fly    64 LPGIKLPNNLIAVNDLLEAAQNADILVFSTPLEFVQSYCNILSGNVKESAFAVSMTKGLLSENGE 128
            |.|||.|:|:.|..|:.:....:||||:..|.:||...||.|.|.:|:.|.|:|..|| :|...:
pombe    90 LKGIKCPSNVFANPDIRDVGSRSDILVWVLPHQFVVRICNQLKGCLKKDAVAISCIKG-VSVTKD 153

  Fly   129 GIELVSHAISESLGIPCYSMMSAHSAMEMAQGKLCEVTIGCSDNSH------SKLLISAMQTNNC 187
            .:.|.|..|.|:.|:.|..:..|:.|.|:||.|.||.|||...||.      .|.:.:.......
pombe   154 RVRLFSDIIEENTGMYCGVLSGANIASEVAQEKFCETTIGYLPNSSVNPRYTPKTIQALFNRPYF 218

  Fly   188 RVISVNDVDGVELCGTLTDVVALGAGFIDGLRLGENARLAAIHLGVKEIMRFIKTFFPSSKMSTF 252
            ||..|.||.||.|.|.|.::||:.||.||||.||:|.:.|.:.:|:.|:.:|.:.||....::..
pombe   219 RVNIVEDVPGVALGGALKNIVAVAAGIIDGLELGDNTKSAVMRIGLLEMQKFGRMFFDCKPLTMS 283

  Fly   253 YESCGVTNAVASSFVDKNVTFAKSLVTSGQTIEEIEANLHSGRKLLGPMVASNVNAFLENGLMQH 317
            .||||:.:.:.:....:|...|.:.|.:|:.:..:|..|..|:||.|...|..|..||:|.....
pombe   284 EESCGIADLITTCLGGRNHKCAVAFVKTGKPMHVVEQELLDGQKLQGAATAKEVYEFLDNQNKVS 348

  Fly   318 EFPLFTAIHLICQSEAPPELMIEAL 342
            |||||||::.|.....||..::||:
pombe   349 EFPLFTAVYRIVYEGLPPNKLLEAI 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpdh3NP_732726.2 glycerol3P_DH 6..342 CDD:274551 128/347 (37%)
COG5022 <463..952 CDD:227355
Mplasa_alph_rch <540..730 CDD:275316
PRK13729 914..>1153 CDD:184281
gpd2NP_594542.1 glycerol3P_DH 26..373 CDD:274551 128/347 (37%)
Blue background indicates that the domain is not in the aligned region.

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