DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpdh3 and gpdh-2

DIOPT Version :10

Sequence 1:NP_732726.2 Gene:Gpdh3 / 42624 FlyBaseID:FBgn0263048 Length:1304 Species:Drosophila melanogaster
Sequence 2:NP_871632.1 Gene:gpdh-2 / 176399 WormBaseID:WBGene00010778 Length:392 Species:Caenorhabditis elegans


Alignment Length:354 Identity:136/354 - (38%)
Similarity:208/354 - (58%) Gaps:12/354 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KICIIGAEGWGSAIAAVVSNNV--LEGDFDSRVHLYVYDEMIRDTALSEIINTRHENVKYLPGIK 68
            |:.|||:..||||||.:|.:..  ...:||..|.::|::|::....|||:||.||||:|||||..
 Worm    37 KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEEIVNGEKLSEVINNRHENIKYLPGKV 101

  Fly    69 LPNNLIAVNDLLEAAQNADILVFSTPLEFVQSYCNILSGNVKESAFAVSMTKGL---------LS 124
            ||||::||.||:|:.:.:::|||..|.:||:..|..|.|.:.....|:|:.||:         .:
 Worm   102 LPNNVVAVTDLVESCEGSNVLVFVVPHQFVKGICEKLVGKIPADTQAISLIKGISFDKTNQGVST 166

  Fly   125 ENGEGIELVSHAISESLGIPCYSMMSAHSAMEMAQGKLCEVTIGCSDNSH-SKLLISAMQTNNCR 188
            |...|::|:|..|.|.|.|....:|.|:.|.|:|....||.||||...:. ..||.....|:|.|
 Worm   167 EKRGGLKLISEEIKEILKIEVSVLMGANLAPEVANDNFCEATIGCKRKAEDGPLLKKLFHTDNFR 231

  Fly   189 VISVNDVDGVELCGTLTDVVALGAGFIDGLRLGENARLAAIHLGVKEIMRFIKTFFPSSKMSTFY 253
            :..|.|...|||||.|.:|||..|||.|||..|:|.:.|.|.||:.|..:|::.::|.|.:.||:
 Worm   232 INVVEDAHTVELCGALKNVVACAAGFTDGLGYGDNTKAAVIRLGLMETTKFVEHYYPGSNLQTFF 296

  Fly   254 ESCGVTNAVASSFVDKNVTFAKSLVTSGQTIEEIEANLHSGRKLLGPMVASNVNAFLENGLMQHE 318
            ||||:.:.:.:.:..:|....::.|.:|:::.|:|..|.:|:...||:.|..|...:....:..:
 Worm   297 ESCGIADLITTCYGGRNRKVCEAFVKTGKSMAEVEKELLNGQSAQGPLTAEEVYLMMHKTGLDAK 361

  Fly   319 FPLFTAIHLICQSEAPPELMIEALRNHPD 347
            ||||||:|.||..|..|..:::.|||||:
 Worm   362 FPLFTAVHKICAGEMKPAELVDCLRNHPE 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpdh3NP_732726.2 glycerol3P_DH 6..342 CDD:274551 131/347 (38%)
COG5022 <463..952 CDD:227355
Mplasa_alph_rch <540..730 CDD:275316
PRK13729 914..>1153 CDD:184281
gpdh-2NP_871632.1 glycerol3P_DH 37..385 CDD:274551 131/347 (38%)
Blue background indicates that the domain is not in the aligned region.

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