DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpdh3 and gpdh-1

DIOPT Version :10

Sequence 1:NP_732726.2 Gene:Gpdh3 / 42624 FlyBaseID:FBgn0263048 Length:1304 Species:Drosophila melanogaster
Sequence 2:NP_493454.1 Gene:gpdh-1 / 173272 WormBaseID:WBGene00009824 Length:374 Species:Caenorhabditis elegans


Alignment Length:355 Identity:132/355 - (37%)
Similarity:202/355 - (56%) Gaps:18/355 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KICIIGAEGWGSAIAAVVSNNVLEGD--FDSRVHLYVYDEMIRDT--------ALSEIINTRHEN 60
            ||.|:|...||||||.||...|...|  |...|.::     .||:        :::|.||:.|||
 Worm    23 KIAIVGGGNWGSAIACVVGKTVKAQDEVFQPIVSIW-----CRDSRKPGDLSPSIAETINSTHEN 82

  Fly    61 VKYLPGIKLPNNLIAVNDLLEAAQNADILVFSTPLEFVQSYCNILSGNVKESAFAVSMTKGLLS- 124
            .|||||.::|:|::|.:.||||.|:|.||:...|.:.:...|:.|.|.:::.|.|:|:|||:.| 
 Worm    83 PKYLPGRRIPDNVVATSSLLEACQSAHILILVVPHQGIPQICDELRGKLQKGAHAISLTKGISSS 147

  Fly   125 -ENGE-GIELVSHAISESLGIPCYSMMSAHSAMEMAQGKLCEVTIGCSDNSHSKLLISAMQTNNC 187
             |||| .::|:|..|..:||:.|..:|.|:.|.|:|.||.||.||||....:.:.|.....|.|.
 Worm   148 CENGEIKMQLISEDIERALGVQCSVLMGANLAGEVADGKFCEATIGCKSLKNGEELKKVFDTPNF 212

  Fly   188 RVISVNDVDGVELCGTLTDVVALGAGFIDGLRLGENARLAAIHLGVKEIMRFIKTFFPSSKMSTF 252
            |:....|.:.|||||.|.::||..|||.|||....|.:.|.|.||:.|..:|::.|:|||...|:
 Worm   213 RIRVTTDYEAVELCGALKNIVACAAGFADGLGWAYNVKSAIIRLGLLETKKFVEHFYPSSVGHTY 277

  Fly   253 YESCGVTNAVASSFVDKNVTFAKSLVTSGQTIEEIEANLHSGRKLLGPMVASNVNAFLENGLMQH 317
            :|||||.:.:.:.:..:|...|::.:.|.:.:..||..|..|:...||..|.:|...||...:..
 Worm   278 FESCGVADLITTCYGGRNRKVAEAFIKSDKPLRVIEQELLKGQSAQGPPTAQDVYEMLEINEISE 342

  Fly   318 EFPLFTAIHLICQSEAPPELMIEALRNHPD 347
            :||:|.::|.:.......:.:.::|||||:
 Worm   343 KFPIFASVHKVFTGHHGEQELYDSLRNHPE 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpdh3NP_732726.2 glycerol3P_DH 6..342 CDD:274551 127/348 (36%)
COG5022 <463..952 CDD:227355
Mplasa_alph_rch <540..730 CDD:275316
PRK13729 914..>1153 CDD:184281
gpdh-1NP_493454.1 glycerol3P_DH 23..367 CDD:274551 127/348 (36%)
Blue background indicates that the domain is not in the aligned region.

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