DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18596 and Tarbp1

DIOPT Version :9

Sequence 1:NP_651031.1 Gene:CG18596 / 42622 FlyBaseID:FBgn0038953 Length:1136 Species:Drosophila melanogaster
Sequence 2:NP_001153379.1 Gene:Tarbp1 / 212728 MGIID:4936930 Length:1579 Species:Mus musculus


Alignment Length:1597 Identity:346/1597 - (21%)
Similarity:555/1597 - (34%) Gaps:524/1597 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ATTATTTHAVVQAVETYIQNQNLLGEIAE--LDDMLYDLVSMHKDNELALKRVLQCIHNLLQTNS 70
            |..|.|...|:|.:|........|.:.|.  ..|.|..|:...:....|..|||:.....|::.:
Mouse    30 AERAETLRLVLQRLEERGAGAGALAKAAHEVARDHLVPLLHASQGGGPARPRVLRAASAALRSCA 94

  Fly    71 KYNVRFGPKVFHKLVSVVIADS--RE-DSASRRQLVANLLVCVQLH-----IRKFPRIEAKFVL- 126
            :.   .||:     ::|.:|:.  || .||...:|:|.:..|::..     :|:..|...:..| 
Mouse    95 RL---AGPE-----LAVTLAEEALRELPSAPAVELLAAVAPCLRAPEDAPLLRRLGRASVELALA 151

  Fly   127 ---------QQLWSLSQSNERQPHAAQILVHLFDDFVNNLGT----ECAQELLVLT---RNLLQS 175
                     :.|.:|:||.|....||.       |.:::.|.    ....|||||:   ..||.:
Mouse   152 GDAPPAVGARLLPALAQSAEPALRAAW-------DALSSAGPGAEGSTGPELLVLSALAEKLLTN 209

  Fly   176 DVRDD---------------------------RRSAYFLMHKLQEIDEVLAALQCSEVQ------ 207
            ..|..                           :|:.|.|...:|...|:.....||...      
Mouse   210 HERHGDLDARLCGRFWRTVQAGLGRAQDGLTRKRARYLLQRAVQVSAELAVDCSCSPQDTKGPSL 274

  Fly   208 --------------WSAYVGIMENLEEQQSHLVLPTLSTLLPRMG-LMSNNLSED---WL---DW 251
                          |..|:.|||.||..|.|::.|.    ||::. |....:||:   ||   .|
Mouse   275 FWWSEKRKDELLKFWENYILIMEILEGNQIHVIKPA----LPKLNRLFECAVSEENGCWLFHPSW 335

  Fly   252 LRILCIRLLGDNNILVLRWTLKYFLSHFSLEQISRFNLLTQFLA-----ATNRTQLYN------- 304
            ...:..|:....|.::.:..:.:||..:.::.:.....|::|:.     |.:.:.||:       
Mouse   336 HTCIYKRMFESENKILAKEGVIHFLELYDVKSLPYSPELSEFITGPLMDALSESCLYSRSPGQPL 400

  Fly   305 -PEVPDCLTKQQ-ITDFSAQFPAEI-------LLEALVCVPWHAVPLIHWLQAWELKQLP---VV 357
             .:.|..|..|: :..:::..|.|.       |::.:....|.|||::...:|  |..:|   .:
Mouse   401 GSDSPLGLKLQKFLVTYTSLLPEETKSCFLLKLIQRMADRHWCAVPVLFLSRA--LASIPSCKAL 463

  Fly   358 SKELLFKLG---ARVRSLQNPVLRGEAINYVIFSLSATID--SLSLGDYLLFMESL-------YN 410
            ..|.|..|.   .|.......:|||.|..|::.:....:|  .:||.|...|:.||       ..
Mouse   464 GGEGLLALRDVLQRTMITHQVLLRGAAQCYLLQTAMRLVDVEKVSLSDISAFLLSLRQEESLGRG 528

  Fly   411 TI------------DRYQSHSQLAQKIRNCSNLEKHIASFNIRCCELVSQ--------------- 448
            |:            :||...|.|       ...:...||.|.....||.:               
Mouse   529 TVLWTELCDWLRVNERYFKQSSL-------GGSDGQEASLNAYVKNLVQEFVKSPGWEKESSFMP 586

  Fly   449 --MDYKHDVFVAFL----EKLRTVPKSKHGWWRLLPIFLHRELD-----HPEQYLDFYRS--VYD 500
              :|.:....:..|    |.|:|..:.|.....:|.|||...||     ....|:...|:  ...
Mouse   587 DWLDARLTALMVLLAVDVEGLKTKFREKQRTQNVLRIFLDPLLDALGKLGTNAYMPLLRTDRCLQ 651

  Fly   501 LDTSFLESGV---------------------SLEQMQQHLLNRL--------------------- 523
            |....|.|.|                     :.|.:.|.:|.||                     
Mouse   652 LLVRLLHSCVPRRPGAQDDEVSTALQGSIMSASESVSQFVLRRLTMNELQDVADLDRCQLYLTVL 716

  Fly   524 ----------------------------------DCQTREEKSFVLEHSVDLFVQINL------- 547
                                              :.:.|:|.:  |.|.|...|.:..       
Mouse   717 SELMSLQVKLGWKAGNPISRVLSPLKNACVRHLQEAEDRQEPT--LSHQVQRVVSMAALAALCEA 779

  Fly   548 ---------------PTWSKLEVLNLN----------------PLE--------LLDRG------ 567
                           |....|..|.||                |||        |..:|      
Mouse   780 VDQYPVLQPDSPNAEPVDRFLSALPLNHVLQKPRSEEQSIGVCPLENGSVFEESLSSKGWGKVVA 844

  Fly   568 --TEETFATLSNILSTHDEQL--ADQNVLPAFISRLGKLKVRETQAIL----------------- 611
              ..:.:..||.:|..|...:  .:.:||..|:. ..:..|:..||.|                 
Mouse   845 QYLHDQWVCLSFLLRKHHHLIPSTESDVLEGFLP-TAETPVQALQAALDVLTVLPAGRILPVFRC 908

  Fly   612 -KYAVQNLSSEEYEKCV--VDV------------------------------------------- 630
             :..|..|.:.|...|:  .||                                           
Mouse   909 MEVLVPKLLTSEETLCIESFDVAWKIISSLSNTQLTFWPNLKAFVHFVFDHEILTIAAKLKGQVY 973

  Fly   631 ----------LEKNTFLLGTMD------CEEYIKAPT-----SF---------VIKRMLQGETTT 665
                      :|.::...|..:      |:.::.|.:     ||         |::..:.|....
Mouse   974 FKIKEIMCKMIEMSSIKSGVFNILIRHCCQSWLVAASGVSQGSFSSAKDYSELVLEACVFGTVFR 1038

  Fly   666 GDAR----IERAFEQISDTGAMD-------------RVQFIQYAKNSTGLDISF------ICDDL 707
            .|.|    ::...|.:....|.:             |:..|::.....|.|:|.      :...|
Mouse  1039 RDQRLIQDVQTFIENLGQGCAANVIIENAKREDYYVRICAIKFLCLLDGSDVSHKLFLEALAIKL 1103

  Fly   708 LRMNNELSRKKPRYFANCKEHRMKMRIGKALLDLSDRWKWS------DNLWEAVLCPSDQPNISF 766
            |..:...||.:.||..|..:||:|.|:.:.||.|...:..:      |.::.|.. .::|.:|.:
Mouse  1104 LDKDESASRSRTRYHENSLQHRVKNRVWQTLLVLFPAFDQNFLHGIIDKVFHAGF-TNNQASIKY 1167

  Fly   767 MYEYLVSKMLPSIDLLLEQL---------KLLATLKPSQQISLVSVV-HIYCLTRWESIQHEQLV 821
            ..|:|:..:|......|.:.         |:.|::     .:.:||: |:..:.  ::|..::||
Mouse  1168 FIEWLIILILHKFPEFLPKFWACFSYGEEKIKASI-----CTFLSVLSHLDIIV--QNIPEKKLV 1225

  Fly   822 --EVFAVLLPLTMGANFQTRLLAQLVLHRICSECEDRSIQMPIADALKKSIKVTLSEKLTEFQCE 884
              :...|.|...:..||..||.|.:.|.:....|  :::|.....|....|:.:||      |.|
Mouse  1226 LKQALTVALQWCLSHNFSVRLYALVALKKAWHLC--KTLQFEECGAWTAVIECSLS------QAE 1282

  Fly   885 ARLLLPELGKQCPTSVSDCILMMTNAPFDENISFISCSYDFRMKLKR----------ALETFKRK 939
            :........|.. ..:.|.....|..|..:     .|.......|.|          ||:.|...
Mouse  1283 SMHGAGNARKNW-QRIQDHFFFSTFHPLKD-----YCLETIFYTLPRLSGVTGEEWIALDKFANF 1341

  Fly   940 QSVLIPELATSLAALNG------------------------------NVQRKMNPVGDIYPESDF 974
            ..  ||..|.|...|:|                              :||:|:.|.|....|||.
Mouse  1342 TD--IPSNAGSQWYLSGTALGELSPGDWSQQDQGSTLGEADSQSEWADVQKKIIPWGQSALESDL 1404

  Fly   975 VV------SNKARDDHELIVVASLIDKLPNLGGLARTCEVLGVNTLILGLKSQAEKSDFTNLSMT 1033
            .:      :...:....||||||||||..|||||.|||||.|...|::|.........|.:||::
Mouse  1405 ELEFQDRAAKLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGAAVLVVGSLQCVSDRQFQHLSVS 1469

  Fly  1034 AEKTLNILEVNPESLAGFLLEKQMEGYKIVGAEQTAHSTNFVDFKFPKKSILLLGHEKHGIPANL 1098
            ||:.|.::||.|..|..:|.:|:.|||.::|.||||.|::...::||:||:||||:|:.||||||
Mouse  1470 AEQWLPLVEVRPSQLMNYLQQKKAEGYTVIGVEQTAQSSDLAQYRFPEKSLLLLGNEREGIPANL 1534

  Fly  1099 IGFLDYAVEIPQYGLVRSLNVHVAGSLFIWEYCKQHL 1135
            |..||..|||||.|::|||||||:|:|.||||.:|.|
Mouse  1535 IQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQL 1571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18596NP_651031.1 SpoU_methylase 986..1128 CDD:278985 77/141 (55%)
Tarbp1NP_001153379.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 158 1.000 Domainoid score I4122
eggNOG 1 0.900 - - E1_COG0566
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 244 1.000 Inparanoid score I3281
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002756
OrthoInspector 1 1.000 - - oto94496
orthoMCL 1 0.900 - - OOG6_102883
Panther 1 1.100 - - LDO PTHR12029
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2317
SonicParanoid 1 1.000 - - X4127
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.850

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