DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PyK and PKP-ALPHA

DIOPT Version :9

Sequence 1:NP_524448.3 Gene:PyK / 42620 FlyBaseID:FBgn0267385 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_566720.1 Gene:PKP-ALPHA / 821870 AraportID:AT3G22960 Length:596 Species:Arabidopsis thaliana


Alignment Length:504 Identity:169/504 - (33%)
Similarity:267/504 - (52%) Gaps:42/504 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 RLSGIVCTIGPASSSVEMLEKMMATGMNIARMNFSHGSHEYHAATVANVRQAVKNYSAKLGYEHP 110
            |.:.::||||||:...|.||.:...|||:||:|..||:.::|...:.:||:    .:.:.|:  .
plant   117 RRTKLICTIGPATCGFEQLEALAVGGMNVARLNMCHGTRDWHRGVIRSVRR----LNEEKGF--A 175

  Fly   111 VAIALDTKGPEIRTGLIGGSGTAEIELKKGEKIKLTTNKEFLEKGSLEIVYVDYENIVNVVKPGN 175
            |||.:||:|.||..|.:||..:|:.|  .|| :...|.:.|........:.|.|:.....|:.|:
plant   176 VAIMMDTEGSEIHMGDLGGEASAKAE--DGE-VWTFTVRAFDSSRPERTISVSYDGFAEDVRVGD 237

  Fly   176 RVFVDDGLISL-IVREVGKDSLTCEVENGGSLGSRKGVNL--PGVPVD-----LPAVSEKDKSDL 232
            .:.||.|::.. ::.::|.| :.|...:.|.|..|..:..  .|..|.     ||.:|.||..|:
plant   238 ELLVDGGMVRFEVIEKIGPD-VKCLCTDPGLLLPRANLTFWRDGSLVRERNAMLPTISSKDWLDI 301

  Fly   233 LFGVEQEVDMIFASFIRNAAALTEIRKVLG--EKGKNIKIISKIENQQGMHNLDEIIEAGDGIMV 295
            .||:.:.||.|..||:::|..:..::..|.  .:|..|.:|:|||:...:.||:|||.|.||.||
plant   302 DFGIAEGVDFIAVSFVKSAEVINHLKSYLAARSRGGEIGVIAKIESIDSLTNLEEIILASDGAMV 366

  Fly   296 ARGDLGIEIPAEKVFLAQKAMIARCNKAGKPVICATQMLESMVKKPRPTRAEISDVANAVLDGAD 360
            ||||||.:||.|:|..||:.::..|....||||.|:|:||||::.|.|||||::||:.||...:|
plant   367 ARGDLGAQIPLEQVPAAQQRIVQVCRALNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRSD 431

  Fly   361 CVMLSGETAKGEYPLECVLTMAKTCKEAEAALW-----HQNLFNDLVRGAGTIDASHAAAIAAVE 420
            .:|||||:|.|::| :..||:.:|........|     |:::....:..:.:...|.....:|.:
plant   432 ALMLSGESAMGQFP-DKALTVLRTVSLRIERWWREEKRHESVPLQAIGSSFSDKISEEICNSAAK 495

  Fly   421 AATKAKASAIVVITTSGKSAFQVSKYRPRCPIIAVTRFAQTARQAHLYRGLVP--LIYKEPGLGD 483
            .|......|:.|.||||..|..||:.||.|||.|.|......|:.:|..||:|  |.:.:     
plant   496 MANNLGVDAVFVYTTSGHMASLVSRCRPDCPIFAFTTTTSVRRRLNLQWGLIPFRLSFSD----- 555

  Fly   484 WLKDVDVRVQFGLQVGKKNGFIKTGDSVVVVTGWKQGSGFTNTIRIVTV 532
               |::..:.....:.|..|.||:||.|:.|      |....:|:::.|
plant   556 ---DMESNLNKTFSLLKSRGMIKSGDLVIAV------SDMLQSIQVMNV 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PyKNP_524448.3 Pyruvate_Kinase 46..532 CDD:238178 168/502 (33%)
pyruv_kin 46..529 CDD:273424 168/499 (34%)
PKP-ALPHANP_566720.1 PLN02762 93..596 CDD:215407 169/504 (34%)
Pyruvate_Kinase 117..584 CDD:304951 166/491 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0469
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D933620at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11817
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.880

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