DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5382 and AT2G14835

DIOPT Version :9

Sequence 1:NP_732721.1 Gene:CG5382 / 42618 FlyBaseID:FBgn0038950 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_565365.1 Gene:AT2G14835 / 815972 AraportID:AT2G14835 Length:343 Species:Arabidopsis thaliana


Alignment Length:341 Identity:96/341 - (28%)
Similarity:140/341 - (41%) Gaps:83/341 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLCKCPKRLVTNQFCFEHRVNVCEHCM-VQSHPKCIVQSYLQWLRDSDYIS-NCTLCGTTLEQG 63
            |.:|||.|  .|..:||.|:..||..|: ...|..|:|::|.:|:.|.:|.. .|..|..|.::|
plant     1 MVVCKCKK--ATRLYCFVHKAPVCGECICFPEHQTCVVRTYSEWVIDGEYDQPKCCQCQATFDEG 63

  Fly    64 ---DCVRLVCYHVFHWDCLNARQAALPANTAPRGHQCPACSVEIFPNANLVSP--VADA------ 117
               ...||.|.|..|..||.:...:.|.:|||.|:.|||||..|:|      |  |.||      
plant    64 AGHQVTRLGCLHAIHTSCLVSLIKSFPPHTAPAGYVCPACSTPIWP------PMMVKDAGSRLHA 122

  Fly   118 -LKSFLSQVNWGRNGLGLALLSEEQSSSLKAIKPKVASQAAVSNMTKVHHIHSGGERERTKPNGH 181
             |:..::|....:|.||...:|  :|:..::..|..||.|.: |::...|...|    ...|:|:
plant   123 LLREVITQTGLEKNLLGNHPVS--RSTESRSPPPAFASDALI-NISSSSHTQEG----NNLPDGY 180

  Fly   182 ----------DAVSPHSVLLMDAFNPPSAGDYASSRRPLLPRQSPIGGT---------------D 221
                      .|||  .::.:|.  |.|||.|..|..|.|...:...|.               |
plant   181 SVAGNGEYSKSAVS--EIVEIDV--PASAGSYMKSSSPGLAAAAARKGVPAVDRQNSETLYYADD 241

  Fly   222 RDDN--KYQRRTP-AELFSRWTRRFYA------PSSRPP----------------WRRTWFLVTA 261
            .|.|  ||.||.| ...|.|....|::      |.:.||                .:|:..:...
plant   242 EDGNRKKYSRRGPLRHKFLRALLPFWSSALPTLPVTAPPRKDAAKADDGSEGRVRHQRSSKMDIR 306

  Fly   262 GILAFVLFVYLMAWLG 277
            .||.|:..:..||.:|
plant   307 KILIFIALIACMATMG 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5382NP_732721.1 zf-RING_2 52..100 CDD:290367 18/50 (36%)
TctB <235..>277 CDD:284693 12/63 (19%)
AT2G14835NP_565365.1 RING_Ubox 51..107 CDD:327409 21/55 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 95 1.000 Domainoid score I2489
eggNOG 1 0.900 - - E1_KOG3970
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 96 1.000 Inparanoid score I2220
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D807302at2759
OrthoFinder 1 1.000 - - FOG0006162
OrthoInspector 1 1.000 - - oto3874
orthoMCL 1 0.900 - - OOG6_105755
Panther 1 1.100 - - LDO PTHR12981
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4450
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.830

Return to query results.
Submit another query.