DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7071 and Tmem199

DIOPT Version :10

Sequence 1:NP_651027.1 Gene:CG7071 / 42617 FlyBaseID:FBgn0260467 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_001020163.1 Gene:Tmem199 / 303332 RGDID:1566425 Length:208 Species:Rattus norvegicus


Alignment Length:216 Identity:61/216 - (28%)
Similarity:108/216 - (50%) Gaps:29/216 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 RIIK--DAGLEYKRPKLNYELLTKLTENLADKPEEPAKDKSEPDSGVKDSDDAKSTREVKHFLYL 115
            |:::  |.|.|.:|.:|..:|..:|...|..|           .:|   ||:|...|.:..|..:
  Rat    10 RLVRALDPGGELEREQLPRKLRAQLEAALGKK-----------HAG---SDNATGPRRLVSFRLI 60

  Fly   116 TDLHWLSKTLAELRRQDHCQVFLHQLIESCDLLLPENEMKPRNPELEARCQRLRAEQQNRDYLKM 180
            .|||       :..|:.:..::||:|:|..::..||....||||||.||.::::.:..|.:|.::
  Rat    61 RDLH-------QHLRERNSMLYLHELLEGSEIYFPEIVKPPRNPELVARLEKIKIQLANEEYKRI 118

  Fly   181 TKNV---DAGLKHYPEDTISYQIKSLNKQIIAVVQFIFSVAAGFTFGFFGVNLMVGPLPFGFRIL 242
            |:||   ||.......| :..|::|:...:|.:..||.:|||.|...:.|...:...:  ..|:|
  Rat   119 TRNVTCQDAQCGGTLSD-LGKQVRSVKALVITIFNFIVTVAAAFVCTYLGSQYIFTEM--ASRVL 180

  Fly   243 LGVIVALIIALAEMYFLAKKL 263
            ..:|||.::.|||:|.:.:.:
  Rat   181 AALIVASVVGLAELYVMVRAM 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7071NP_651027.1 Vma12 140..268 CDD:463329 39/127 (31%)
Tmem199NP_001020163.1 Vma12 78..201 CDD:463329 39/125 (31%)

Return to query results.
Submit another query.