DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sar1 and ARF3

DIOPT Version :9

Sequence 1:NP_732717.1 Gene:Sar1 / 42615 FlyBaseID:FBgn0038947 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_014737.1 Gene:ARF3 / 854261 SGDID:S000005620 Length:183 Species:Saccharomyces cerevisiae


Alignment Length:180 Identity:61/180 - (33%)
Similarity:97/180 - (53%) Gaps:12/180 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VLGYLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDKLAQHVPTLHPTSEELSIGNMRFTTFDLGGH 74
            |||.| ...|..|:|.||||.|||||:|:.||.:|:....||:....|.::..|::|..:|:||.
Yeast     8 VLGKL-FGSKEMKILMLGLDKAGKTTILYKLKLNKIKTSTPTVGFNVETVTYKNVKFNMWDVGGQ 71

  Fly    75 TQARRVWKDYFPAVDAIVFLIDAWDRGRFQESKNELDSLLTDEALSNCPVLILGNKIDKPGAASE 139
            .:.|.:|:.||||..|::|:||:..|.|.:|:|.||.|::.::.:.|..:|:..||.|...|...
Yeast    72 QRLRPLWRHYFPATTALIFVIDSSARNRMEEAKEELYSIIGEKEMENVVLLVWANKQDLKDAMKP 136

  Fly   140 DELRNVFGLYQLTTGKGKVARADLPGRPLELFMCSVLKRQGYGEGFRWLA 189
            .|:.:...|           ..:|..:|..:...:.|..||..||..|::
Yeast   137 QEVSDFLEL-----------EKNLKNQPWCVIGSNALSGQGLVEGLSWIS 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sar1NP_732717.1 Sar1 2..192 CDD:206645 61/180 (34%)
ARF3NP_014737.1 Arf6 9..177 CDD:206716 60/179 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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