DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sar1 and arl3b

DIOPT Version :9

Sequence 1:NP_732717.1 Gene:Sar1 / 42615 FlyBaseID:FBgn0038947 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_001038373.1 Gene:arl3b / 797451 ZFINID:ZDB-GENE-030131-7518 Length:182 Species:Danio rerio


Alignment Length:190 Identity:57/190 - (30%)
Similarity:92/190 - (48%) Gaps:19/190 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LGYLGLWKK-------SGKLLFLGLDNAGKTTLLHMLKDDKLAQHVPTLHPTSEELSIGNMRFTT 68
            :|.|.:.:|       ..::|.|||||.||||||..|..:.:....||.....:.:.....:...
Zfish     1 MGLLSILRKLKSTPDQEVRILLLGLDNGGKTTLLKQLASEDITHITPTQGFNIKSVQSQGFKLNV 65

  Fly    69 FDLGGHTQARRVWKDYFPAVDAIVFLIDAWDRGRFQESKNELDSLLTDEALSNCPVLILGNKIDK 133
            :|:||..:.|..|::||...|.::::||:.||.||:|:..||..||.:|.||..|||:..||.|.
Zfish    66 WDIGGQRKIRPYWRNYFENTDVLIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLVFANKQDL 130

  Fly   134 PGAASEDELRNVFGLYQLTTGKGKVARADLPGRPLELFMCSVLKRQGYGEGFRWLAQYID 193
            ..||...|:.....|:.:.            .|..::..||.|..:|..:|..|:.:.::
Zfish   131 LTAAPASEIAEGLNLHTIR------------DRVWQIQSCSALTGEGVQDGMNWVCKSVN 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sar1NP_732717.1 Sar1 2..192 CDD:206645 57/187 (30%)
arl3bNP_001038373.1 Arl3 3..175 CDD:206721 56/183 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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